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. 2021 Jan 25;11:592908. doi: 10.3389/fmicb.2020.592908

TABLE 3.

Docking of SARS-CoV-2 Mpro and PLpro against different drugs.

Drug Viral proteins MolDock score Protein – ligand interactions H-bonds Interacting amino acids
Lopinavir Mpro –114.628 –159.244 –10.981 Gln110, Thr111, Asn151
PLpro –123.992 –149.066 –2.542 Asn156, Try171
Chloroquine Mpro –93.634 –107.868 –2.500 Ser158
PLpro –84.358 –87.406 –7.268 Thr74, Arg82, Asn156
Hydroxychloroquine Mpro –95.414 –112.507 –5.438 Gln109, Ser158, Asn203,
PLpro –90.097 –89.041 –2.500 Tyr154
Ivermectin Mpro –114.860 –126.234 –7.944 Asn151, Asp153, Asn203
PLpro –180.765 –165.337 –21.212 Thr74, Asn128, Gln174, Leu178
Remdesivir Mpro –123.033 –137.126 –20.588 Gln110, Thr111, Asn151, Ser158, Thr292
PLpro –141.949 –137.610 –20.198 Thr74, Thr75, Asp76, Ala153, His175
Favipiravir Mpro –58.123 –50.902 –19.210 Thr111, Asn151, Arg298
PLpro –58.161 –72.140 –13.428 Phe173, Gln174, Leu178, Val202

Mpro, Main protease (PDB id = 6Y2E); PLpro, Papain like protease (PBD id: 6W9C).