Chemicals, Peptides, and Recombinant Proteins |
3,3-Diaminobenzidine tetrahydrochloride (DAB) |
EMS |
13080 |
3,4-Diaminopyridine (3.4-DAP) |
Sigma |
D7148 |
6-Cyano-7-nitroquinoxaline-2, 3-dione (CNQX) |
Tocris |
0190 |
Absolute Ethanol |
Decon Labs |
2716 |
B27 supplement, serum free |
Gibco |
17504044 |
Bicuculline |
Sigma |
14340 |
BioMix Red 2X |
Thermo Fisher Scientific |
BIO25006 |
Biotinylated goat anti rabbit antibody |
Vector Labs |
BA-1000 |
Bovine serum albumin |
Sigma |
A2153 |
Bovine serum albumin |
American Analytical |
AB01088 |
Collagenase P |
Sigma |
11249002001 |
Cytosine β-D-arabinofuranoside |
Sigma |
C1768 |
D(−)-2-Amino-5-phosphonovaleric acid |
Tocris |
3693 |
DMEM medium |
Thermo Fisher Scientific |
11885–092 |
DNase |
Worthington |
LK003172-D2 |
Durcupan ACM Epoxy Resin |
EMS |
14040 |
Embed-812 |
EMS |
13940 |
Fetal Bovine Serum |
Thermo Fisher Scientific |
10082–147 |
Formvar |
EMS |
15810 |
German glass coverslips with mouse Laminin coating over PDL layer |
Neuvitro |
GG-25-Laminin |
GlutaMAX-1 |
Gibco |
35050–061 |
HBSS (with Ca and Mg) |
Thermo Fisher Scientific |
14025–134 |
HBSS (without Ca and Mg) |
Thermo Fisher Scientific |
14175–103 |
HEPES |
Thermo Fisher Scientific |
15630080 |
HT supplement |
Thermo Fisher Scientific |
11067030 |
IMDM medium |
Thermo Fisher Scientific |
12440053 |
Insulin |
Sigma |
I5500 |
Latrunculin A |
Tocris |
3973 |
Lipofectamine 2000 |
Thermo Fisher Scientific |
11668019 |
Lipofectamine LTX with PLUS |
Thermo Fisher Scientific |
15338–100 |
Neurobasal-A |
Thermo Fisher Scientific |
10888–022 |
Normal goat serum |
Vector Laboratories |
S-1000–20 |
NucBlue Live ReadyProbes |
Thermo Fisher Scientific |
R37605 |
Opti-MEM |
Thermo Fisher Scientific |
31985070 |
Osmium Tetroxide |
EMS |
19140 |
Ovomucoid inhibitor |
Worthington |
LK003182 |
Papain |
Worthington |
LK003178 |
Penicillin-Streptomycin solution |
Thermo Fisher Scientific |
15140–122 |
Phosphate buffered saline (PBS) |
Gibco |
10010023 |
Pierce 16% formaldehyde, methanol free |
Thermo Fisher Scientific |
28908 |
Propylene Oxide |
EMS |
20401 |
Rabbit Kv3.3 antibody |
Alomone Labs |
APC-102 |
Single slot grids |
EMS |
M2010-CR |
Tetraethylammonium chloride (TEA-Cl) |
Sigma |
T2265 |
Tetrodotoxin (TTX) |
Tocris |
1078 |
Triton X-100 |
Sigma |
T8787 |
Trypsin inhibitor |
Sigma |
T9253 |
Uranyl Acetate |
EMS |
22400 |
Critical Commercial Assays |
Basic Primary Neurons Nucleofector Kit |
Lonza |
VVPI-1003 |
Elite ABC-HRP kit |
Vector Labs |
PK-6100 |
QuickExtract DNA Extraction Solution |
Lucigen |
QE09050 |
QuikChange II XL Site-Directed Mutagenesis Kid |
Agilent |
200521 |
Experimental Models: Cell Lines |
CHO cell |
Kaczmarek lab |
CHO/DHFR (−) |
Experimental Models: Organisms/Strains |
G592R Kv3.3 knock-in mice |
Kaczmarek lab |
N/A |
Kv3.1 KO mice |
Kaczmarek lab |
N/A |
Kv3.3 KO mice |
Kaczmarek lab |
N/A |
B6 line mice |
Kaczmarek lab |
N/A |
Recombinant DNA |
Kv3.3 WT |
Kaczmarek lab |
N/A |
pH-sensitive pHluorin 2X (SypH) |
Yong-Ling Zhu lab |
N/A |
rKv3.3/pcDNA3 |
Kaczmarek lab |
N/A |
W496F Kv3.3 mutant |
Kaczmarek lab |
N/A |
Software and Algorithms |
Clampfit 9 |
Molecular Devices |
https://mdc.custhelp.com/app/answers/detail/a_id/18826/~/axon%E2%84%A2-pclamp%E2%AE-9-electrophysiology-data-acquisition-%26-analysis-software-download |
Huygens Professional |
Scientific Volume Imaging |
https://svi.nl/Huygens-Professional |
Igor Pro |
WaveMetrics |
http://www.wavemetrics.com/ |
Image J |
NIH |
https://imagej.nih.gov/ij/ |
LAS X |
Leica |
https://www.leicabiosystems.com/ |
Matlab |
MathWorks |
https://www.mathworks.com/products/matlab.html |
NIS-Elements AR 4.1 (Nikon A1 confocal microscope) |
Nikon |
https://www.microscope.healthcare.nikon.com/products/software/nis-elements/nis-elements-advanced-research |
Python v3.5.2 |
Python Core Team |
https://www.python.org
|
Pulse v8.67 (EPC-9 amplifier) |
HEKA Elektronik |
https://www.heka.com |