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. 2021 Mar 18;220(5):e202010003. doi: 10.1083/jcb.202010003

Figure S1.

Figure S1.

The Poissonian functional form in the intra-cluster regime. (A) To test the Poissonian functional form (Eq. 1) of the intra-cluster regime of SuperStructure curves, we simulated localizations inside clusters as a uniform distribution of Nem points distributed within a circle of radius Rcl. The resulting average density is ρem. The number of points included in any circular subregion of radius ε is, on average, nε=πρemε2, and is in fact itself Poisson distributed. (B) To check the theoretical prediction of Eq. 1, we have created simulated datasets for various ρem and Nem. The theoretical predictions (dotted lines) with m=2 are in good agreement with the SuperStructure curves, indicating that indeed Eq. 1 correctly captures the behavior of uniformly distributed points forming one idealized cluster. However, note that for m=2, there is already an overcounting of clusters at large values of ε due to the fact that DBSCAN merges indirectly related emitters in a single big cluster. This suggests not to extend the summation to higher values of m. From Eq. 1, the end of the intra-cluster regime can be approximated by the width of the Poisson function, i.e., ε*3κ0 (at 99% confidence level), where κ0=1/πρem is the decay length identified by Eq. 1. This is confirmed by observing that predicted ε* for the curves are ε*(ρem=2,000 μm2)38  nm, ε*(ρem=10,000  μm2)18  nm, and ε*(ρem=100,000 μm2)5.3  nm, which correspond to Ncl/Nem103 (when most of the points have been merged in a single cluster).