TABLE 2.

Summary of differentially expressed (DE) genes between bovine respiratory disease (BRD) clusters.

	Cluster comparison1
Item	*B–A	*C–A	*C–B
Total transcripts	13,404	13,404	13,404
↑ Expression	1,739	3,806	581
↓ Expression	1,670	3,464	1,472
Total DEG	3,409	7,270	2,053
No significant changes	9,995	6,134	11,351

¹Cluster with (*) annotation is upregulated compared with opposite cluster. Transcripts in B upregulated compared with A. Transcripts in C upregulated when compared with A. Transcripts in C upregulated when compared with B.