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. 2021 Mar 5;12:636484. doi: 10.3389/fpls.2021.636484

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Copyright © 2021 Gunjača, Carović-Stanko, Lazarević, Vidak, Petek, Liber and Šatović.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Linkage disequilibrium (LD) decay as a function of distance between SNPs within a chromosome: (A) comparison of four r² measures – r_v² and r_vs² are based on centered IBS kinship: (1) r² = unadj, (2) r_s² = stru, (3) r_v² = kin, (4) r_vs² = kin + stru); (B) comparison of r_vs² based on five different kinship matrices: (1) dominance normalized, (2) dominance centered, (3) distance, (4) normalized, (5) centered.