Table 3.

Concordance between the cytogenetic 2Rc inversion genotype and PCR-RFLP assay genotypes in pooled samples from Senegal, Mali, Benin, and Cameroon

CYT	AGG			Cac8I			BstUI			HaeII			HinfI
	0	1	2	0	1	2	0	1	2	0	1	2	0	1	2
0	88	1	0	86	6	2	82	9	3	70	22	2	91	3	0
1	2	62		4	58	3	5	59	1	4	57	4	3	62	0
2	0	0	34	0	2	35	2	3	32	0	4	33	0	8	29
Concord (%)	184/187 (98.4%)			179/196 (91.3%)			173/196 (88.3%)			160/196 (81.6%)			182/196 (92.9%)

Italic values are those concordant between cytogenetics and the assay

CYT, cytogenetic genotype (0, standard homozygote; 1, heterozygote; 2, inverted homozygote); AGG, aggregate PCR-RFLP genotype (see text); concord (%), concordance between CYT and assay 2Rc genotypes