Table 2.
Results of COATS branch tests for positive selection
| Locus | Length | Best model | Annotation |
|---|---|---|---|
| AM-TVBF-comp57563_c0_seq1.p1_RBHs | 93 | Non-web | 26S proteasome non-ATPase regulatory subunit 14 (PSMD14) |
| TVBF-comp44613_c0_seq1.p1_RBHs | 38 | Non-web | ankyrin repeat domain-containing protein 27-like |
| AM-TVBF-comp45396_c0_seq1.p1_RBHs | 240 | Non-web | ATP synthase subunit b, mitochondrial |
| AM-TVBF-comp58985_c0_seq2.p1_RBHs | 206 | Non-web | ATP synthase subunit beta, mitochondrial |
| AM-TVBF-comp40348_c0_seq1.p1_RBHs | 88 | Non-web | Bystin-like (BYSL) |
| AM-TVBF-comp56406_c0_seq1.p1_RBHs | 115 | Non-web | Cilia- and flagella-associated protein 20 |
| AM-TVBF-comp20801_c0_seq1.p1_RBHs | 50 | Non-web | E3 ubiquitin-protein ligase (MARCH1) |
| AM-TVBF-comp57815_c1_seq1.p1_RBHs | 94 | Non-web | E3 ubiquitin-protein ligase synoviolin (SYVN1) |
| AM-TVBF-comp53073_c0_seq1.p1_RBHs | 101 | Non-web | Electron transfer flavoprotein subunit beta (ETFB) |
| AM-TVBF-comp59149_c2_seq1.p1_RBHs | 160 | Non-web | MKI67 FHA domain-interacting nucleolar phosphoprotein-like |
| AM-TVBF-comp56762_c0_seq1.p1_RBHs | 37 | Non-web | N-alpha-acetyltransferase 35, NatC auxiliary subunit |
| AM-TVBF-comp49528_c2_seq1.p1_RBHs | 122 | Non-web | NEDD8-conjugating enzyme Ubc12 (UBE2M) |
| AM-TVBF-comp26055_c0_seq1.p1_RBHs | 87 | Non-web | Obg-like ATPase 1 |
| AM-TVBF-comp36800_c0_seq1.p1_RBHs | 138 | Non-web | Peroxisomal biogenesis factor 19 |
| AM-TVBF-comp53850_c1_seq1.p1_RBHs | 91 | Non-web | PRKCA-binding protein |
| TVBF-comp54710_c0_seq1.p1_RBHs | 162 | Non-web | Proteasome subunit alpha type-5 (PSMA5) |
| TVBF-comp148043_c0_seq1.p1_RBHs | 149 | Non-web | Putative ATP-dependent RNA helicase me31b |
| AM-TVBF-comp55490_c0_seq1.p1_RBHs | 66 | Non-web | Rab GDP dissociation inhibitor (GDI1) |
| TVBF-comp57571_c0_seq1.p1_RBHs | 137 | Non-web | Ras-related protein Rab-5 |
| AM-TVBF-comp38265_c0_seq1.p1_RBHs\ml | 102 | Non-web | Ras-related protein Rap-2c |
| AM-TVBF-comp58242_c4_seq2.p1_RBHs | 203 | Non-web | Serine/threonine-protein kinase pim-3 |
| AM-TVBF-comp56825_c0_seq1.p1_RBHs | 115 | Non-web | Synaptosomal-associated protein 29-like |
| AM-TVBF-comp58649_c1_seq1.p1_RBHs | 115 | Non-web | Transitional endoplasmic reticulum ATPase TER94 |
| AM-TVBF-comp49097_c0_seq2.p1_RBHs | 111 | Non-web | V-type proton ATPase subunit E |
| AM-TVBF-comp40720_c0_seq1.p1_RBHs | 102 | Spiny Leg | 39S ribosomal protein L10, mitochondrial (MRPL10) |
| AM-TVBF-comp57459_c0_seq1.p1_RBHs | 264 | Spiny Leg | 60S acidic ribosomal protein P0 (RPLP0) |
| TVBF-comp58735_c0_seq1.p1_RBHs | 196 | Spiny Leg | DnaJ-like protein subfamily A member 1 |
| TVBF-comp57965_c0_seq1.p1_RBHs | 344 | Spiny Leg | Elongation factor 2 (EEF2) |
| TVBF-comp49143_c0_seq2.p1_RBHs | 131 | Spiny Leg | NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial |
| AM-TVBF-comp59471_c5_seq1.p1_RBHs | 128 | Spiny Leg | Splicing factor U2AF 50 kDa subunit |
| TVBF-comp49479_c0_seq1.p1_RBHs | 158 | Spiny Leg | Synaptobrevin (YKT6) |
| AM-TVBF-comp54231_c0_seq1.p1_RBHs | 162 | Spiny Leg | TATA-box-binding protein |
| AM-TVBF-comp54631_c0_seq1.p1_RBHs | 72 | Spiny Leg | Ubiquitin-conjugating enzyme E2 Q1 (UBE2Q1) |
| AM-TVBF-comp55223_c0_seq1.p1_RBHs | 115 | Spiny Leg | WD repeat-containing protein 44-like (WDR44) |
Best model chosen by AIC. “Non-web” refers to a model in which selection acts on branches leading to “Spiny Leg” clade and to (Mimetidae + Malkaridae + Arkyidae). Spiny Leg refers to models where selection acts only on the Spiny Leg branch