Table 3.
Top 10 up- and downregulated DElncRNAs.
| Symbol | log2FC | p value | FDR | Regulation |
|---|---|---|---|---|
| OA vs. control | ||||
| NEAT1 | 5.1159 | 1.85E-18 | 1.12E-14 | Up |
| AL512625.3 | 2.570376 | 3.24E-05 | 0.065224 | Up |
| AC016831.6 | 1.728574 | 5.90E-05 | 0.088885 | Up |
| AC111000.4 | 2.064848 | 0.001215 | 0.563632 | Up |
| LINC01341 | 2.02527 | 0.005032 | 0.92186 | Up |
| AC018445.3 | 1.654176 | 0.010542 | 0.999047 | Up |
| AC004231.1 | 1.894872 | 0.01745 | 0.999047 | Up |
| AC114752.2 | 1.692437 | 0.020267 | 0.999047 | Up |
| AP003117.2 | 1.771314 | 0.023032 | 0.999047 | Up |
| AC096642.1 | 1.589585 | 0.025643 | 0.999047 | Up |
| AC005726.2 | -1.66485 | 4.64E-08 | 0.00014 | Down |
| PITRM1-AS1 | -2.72439 | 0.000346 | 0.348099 | Down |
| OVCH1-AS1 | -2.18336 | 0.000714 | 0.478621 | Down |
| AC005082.1 | -2.31905 | 0.002001 | 0.670439 | Down |
| AL162457.1 | -1.71468 | 0.002791 | 0.701277 | Down |
| AC126755.7 | -1.50226 | 0.004787 | 0.92186 | Down |
| AP006545.1 | -1.89154 | 0.011714 | 0.999047 | Down |
| AC020659.1 | -1.60564 | 0.013616 | 0.999047 | Down |
| AC007541.1 | -1.69387 | 0.031639 | 0.999047 | Down |
| AC068870.2 | -1.90393 | 0.039154 | 0.999047 | Down |
| Osteolysis vs. control | ||||
| FLJ42393 | 1.62292 | 7.39E-05 | 0.067195 | Up |
| AC007272.1 | 2.182036 | 0.000975 | 0.279887 | Up |
| AC016831.6 | 1.690991 | 0.001091 | 0.285274 | Up |
| AL359532.1 | 1.86552 | 0.001529 | 0.335756 | Up |
| AL359183.1 | 1.921891 | 0.001606 | 0.340963 | Up |
| AC091185.1 | 1.772238 | 0.001807 | 0.359718 | Up |
| AC018946.1 | 1.549455 | 0.002757 | 0.427746 | Up |
| AC015871.4 | 1.542564 | 0.00288 | 0.427746 | Up |
| AC100788.2 | 1.613121 | 0.003089 | 0.427746 | Up |
| LINC02288 | 1.673173 | 0.003444 | 0.429946 | Up |
| AC123912.4 | -3.00991 | 2.78E-10 | 1.77E-06 | Down |
| AC010615.2 | -3.72122 | 1.34E-06 | 0.004253 | Down |
| DDIT4-AS1 | -1.59273 | 1.65E-05 | 0.033738 | Down |
| AC092490.1 | -2.67119 | 2.42E-05 | 0.033738 | Down |
| AC100810.1 | -2.2893 | 5.65E-05 | 0.059947 | Down |
| SLC2A1-AS1 | -2.12909 | 0.000292 | 0.191562 | Down |
| AC100835.2 | -2.25064 | 0.000369 | 0.195639 | Down |
| AC097478.1 | -2.43982 | 0.000553 | 0.242589 | Down |
| LINC00570 | -2.3716 | 0.000559 | 0.242589 | Down |
| MIR9-3HG | -2.61167 | 0.000581 | 0.242589 | Down |
| Osteolysis vs. OA | ||||
| AC016737.1 | 2.007544 | 0.000286 | 0.459454 | Up |
| AC124319.2 | 1.591514 | 0.003026 | 0.999986 | Up |
| AL357078.3 | 1.935801 | 0.005568 | 0.999986 | Up |
| AL139020.1 | 2.119999 | 0.007539 | 0.999986 | Up |
| AC004263.1 | 1.824237 | 0.015321 | 0.999986 | Up |
| AC018653.3 | 1.519922 | 0.020607 | 0.999986 | Up |
| AC099521.2 | 1.851515 | 0.024567 | 0.999986 | Up |
| AC110801.1 | 2.016041 | 0.0264 | 0.999986 | Up |
| AL022328.1 | 1.56358 | 0.02739 | 0.999986 | Up |
| AL844908.2 | 1.529839 | 0.03055 | 0.999986 | Up |
| AC123912.4 | -3.68915 | 3.62E-08 | 0.000233 | Down |
| AC010615.2 | -3.84396 | 5.84E-06 | 0.018749 | Down |
| AL356489.2 | -3.8055 | 0.000598 | 0.654803 | Down |
| AC092821.3 | -1.68773 | 0.001213 | 0.866219 | Down |
| KRT73-AS1 | -1.77092 | 0.002183 | 0.999986 | Down |
| FP236383.2 | -1.99999 | 0.002243 | 0.999986 | Down |
| AL159978.1 | -2.32724 | 0.003423 | 0.999986 | Down |
| TPM1-AS | -1.77588 | 0.003634 | 0.999986 | Down |
| MIR9-3HG | -1.88441 | 0.004272 | 0.999986 | Down |
| LINC00570 | -1.98324 | 0.005975 | 0.999986 | Down |
FC: fold change; FDR: false discovery rate; OA: osteoarthritis.