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. 2021 Mar 22;11(4):188. doi: 10.1007/s13205-021-02744-5

Table 1.

Musa genome locus identifier and primer sequences of genes displaying altered expression in MusaSNAC1 overexpressing lines

S. No Musa genome locus identifier Forward primer and reverse primer Annotation in banana genome sequence database Closest homologues in Arabidopsis (accession number)
1 GSMUA_Achr3T08680_001

5′-GTGATCATGTCATCCGAAAA-3’

5′-GTCTCGGTCTTCTCCTCTCA-3’

Two-component response regulator ARR9

ARR8 (XP_020884524.1);

ARR9 (NP_001325622.1)

2 GSMUA_Achr5T08230_001

5′-ACAGGGTATGACCTCCTCAA-3’

5′-CTGCTGATGATGATGGTGTT-3’

Two-component response regulator ARR9

ARR8 (XP_020884524.1);

ARR9 (NP_001325622.1)

3 GSMUA_Achr10T06040_001

5′-AAACCGAGTTCGTCCACTTA-3’

5′-TATTGCATCAACATCCAACC-3’

Putative two-component response regulator

Arabidopsis response regulator 12

(NP_180090.6);

ARR10 (XP_002867269.1)

4 GSMUA_Achr1T17800_001

5′-GCAGCTCCAAGTACAGAGTG-3’

5′-GGCTTGAGCAGGAAATCTAC-3’

Two-component response regulator ARR9

ARR4 (NP_001321924.1);

ARR9 (NP_001325622.1)

5 GSMUA_Achr11T08310_001

5′-CTCTCAGCAGAAATGGGATT-3’

5′-GAGCCGTATTCACCCTTAAA-3’

Putative two-component response regulator

Arabidopsis response regulator 12

(NP_180090.6)

6 GSMUA_Achr2T05130_001

5′-CACCTCTGAGTGATCCAACA-3’

5′-CATTCTCTGATGCCTGACAC-3’

Two-component response regulator ARR12

Arabidopsis response regulator 12

(NP_180090.6)

7 GSMUA_Achr4T21020_001

5′-ACTGTGGCTCTCAAGGAATGA-3’

5′-TTGCACTTCTCCATTGCTCTT-3’

Auxin-responsive protein IAA30

Indoleacetic acid-induced protein 14

(NP_193191.2);

IAA9 (OAO96506.1)

8 GSMUA_Achr4T22520_001

5′-CTGGCTGTCCAATCTGAGAAG-3’

5′-ACCCACAGCTTGATGAAACAC-3’

Indoleacetic acid-induced protein 30

Indoleacetic acid-induced protein 16

(NP_187124.1)

9 GSMUA_Achr9T24330_001

5′-TGTAGCCAAGAAACAGGTCGT-3’

5′-TCCTTCTGCACCACCTAAAGA-3’

Auxin-induced protein 22D

Indoleacetic acid-induced protein 4

(XP_020871044.1)

10 GSMUA_Achr9T25550_001

5′-AGGGGGTTCGCTGAGACTAT-3’

5′-CCTTGCTTCCCTTCTCAGAGT-3’

Indoleacetic acid-induced protein 16

Indoleacetic acid-induced protein 16

(NP_187124.1)

11 GSMUA_Achr8T13620_001

5′-CCCTGAAGGGAACACTGACC-3’

5′-GCAGATGCATCACCGAGAGT-3’

Auxin response factor 12

Auxin response factor 8

(XP_020873073.1)