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. 2021 Jan 9;230(1):354–371. doi: 10.1111/nph.17137

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© 2020 The Authors New Phytologist © 2020 New Phytologist Foundation

This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

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Fig. 4 — DNA methylation of long‐terminal repeat (LTR) TEs in resynthesised Brassica napus. Metaplots of CG, CHG and CHH mean weighted methylation of all annotated LTR TEs for generations 1, 5 and 10 assessed using Bisulfite‐seq. The six resynthesised lines are shown in purple, the Brassica oleracea progenitor is shown in red Brassica rapa progenitor in blue, and the in silico mock polyploid in black. Methylation levels are shown for the transcription start site (TSS'), gene body, transcription termination site (TTS') and 2 kb upstream and downstream of the TSS and TTS.