Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Mar 23;19:55. doi: 10.1186/s12915-021-00989-3

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

PMC Copyright notice

Fig. 5 — Expression of known and putative effectors of Leptosphaeria maculans within the eight expression clusters. The scaled Log₂(FPKM + 1) expression values for the nine avirulence effector (AvrLm) genes, and the eleven candidate late effector genes shown to be upregulated in at least one set of conditions in planta are represented and grouped according to cluster assignment. The mean scaled Log₂(FPKM + 1) values of all the small secreted protein (SSP) genes in each cluster are indicated (black bold curve). The total number of SSP genes in each cluster is indicated. The conditions are described in the legend to the x-axis. Three sample features are described: (i) the experimental conditions: IPF, in planta field conditions; IPC, in planta controlled conditions; RF, residues in field conditions; (ii) the type of plant tissue sampled; and (iii) the sampling time points (DPI, days post inoculation; MPS, months post sowing; MPH, months post harvest)