Table 1.
P1 | P1 | P2 | P3 | P3 | P4 | P4 | P5 | P5 | ||
---|---|---|---|---|---|---|---|---|---|---|
ADA2 mutation | Nucleotide Changes | c.1232A > G | c.983A > T | c.13G > C | c.878A > C | c.263A > G | c.506G > A | c.393delG | c.254A > T | c.851G > T |
Amino Acid Changes | p.Y411C | p.N328I | p.G5R | p.H293P | p.Y88C | p.R169Q | p.R131Sfsb52 | p.N85I | p.G284V | |
Gene Type | het | het | het | het | het | het | het | het | het | |
Gene Database | dbsnp147 | rs376785840 | – | rs202134424 | rs2231495 | – | rs77563738 | – | rs547716532 | – |
PathSNP | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
MutInNormal | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
1000Genome | N/A | N/A | N/A | chr22–17,669,306 | N/A | chr22–17,687,997 | N/A | N/A | N/A | |
MutInDatabase | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
MAF | 1000g2015aug_all | – | – | – | – | – | 0.0002 | – | – | – |
ESP6500si | 0.0002 | – | – | – | – | 0.0005 | – | – | – | |
ExAC_ALL | 0.0001 | – | 0.0000 | 0.00002478 | – | 0.0005 | – | 0.0000 | – | |
ExAC_EAS | – | – | – | – | – | – | – | – | – | |
Patho-genicity speculated by software | SIFT | 0.003 | 0.0 | 0.002 | 0.2 | 0.002 | 0.0 | – | 0.001 | 0.003 |
SIFT_Predict | Damaging | Damaging | Damaging | Tolerated | Damaging | Damaging | – | Damaging | Damaging | |
PolyPhen2 | 0.998 | 1.0 | 0.999 | 0.055 | 0.999 | 0.993 | – | 0.973 | 1.0 | |
PolyPhen2 Predict |
Probably damaging | Probably damaging | Probably damaging | Benign | Probably damaging | Probably damaging | – | Probably damaging | Probably damaging | |
MutationTaster | 0.999 | 1.000 | 1 | 1 | 1 | 1 | – | 1.000 | 1 | |
MutationTaster Predict | Disease causing | Disease causing | Disease causing | Polymorphism_automatic | Disease causing | Polymorphism | – | Disease causing | Disease causing | |
GERP++ | 2.73 | 2.68 | 4.76 | 0.283 | 3.26 | 2.21 | – | 3.54 | 4.02 | |
GERP++ Predict |
Conserved | Conserved | Conserved | Nonconserved | Conserved | Conserved | – | Conserved | Conserved |
N/A, not available