Table 1. Data sets used in this manuscript.

Accession number	Name for dataset used in manuscript	Platform	IPF patients (n)	Healthy controls (n)	References
GSE32537	Schwartz-Univ of Colorado bulk expression cohort	Bulk RNA microarray	119	50	[10]
GSE47460	Kaminski-LGRC bulk expression cohort	Bulk RNA microarray	160	108	[14–17, 22]
GSE124685	Kaminski-Yale Univ bulk progression RNA cohort	Bulk RNA-seq	49	35	[12]
GSE134692	BMS bulk RNA-seq cohort	Bulk RNA-seq	46	26	[18]
GSE132771	Sheppard-UCSF single cell cohort	Single cell RNA-seq	3	3	[19]
GSE135893	Kropski-Vanderbilt Univ single cell cohort	Single cell RNA-seq	19	10	[24]
GSE136831	Kaminski-Yale Univ single cell cohort	Single cell RNA-seq	32	28	[20]