Table 1. Methylation motifs in B. subvibrioides.
| Motifs | Modification type | Candidate methyltransferase gene | Partner restriction endonuclease | Motif predicted by REBASE database | Remarks | % of Motifs methylated | # of Motifs methylated | # of Motifs in Genome |
|---|---|---|---|---|---|---|---|---|
| GANTC | m6A | Bresu_2693a | Absent | Yes | Confirmed in this study | 0.99 | 7765 | 7800 |
| AATT | m6A | Bresu_3035 a | Absent | Yes | Detected in this study | 0.929 | 2204 | 2370 |
| AGGCMGYA | m6A | Bresu_1999 or Bresu_1408 | Absent for both genes | No | Detected in this study | 0.329 | 150 | 455 |
| GGCGCC | m5C | Bresu_0174 a | Absent | Yes | Not detected in this study, predicted motif for C. crescentus ortholog [29] | |||
| CCGCGG | m5C | Bresu_2033 | Bresu_2032 | Yes |
a: Homolog present in C. crescentus