TABLE 4.
Methods | Species | Sample | Condition | Stage | References |
Hi-C | Mouse | Left ventricle (isolated cardiomyocytes) | Control, Transverse Aortic Constriction, CTCF KO | Adult | Rosa-Garrido et al., 2017 |
Hi-C | Human | ESCs, ESC-differentiated cells | WT | ESC-derived mesendoderm cells | Dixon et al., 2015 |
Hi-C | Human | Left ventricle | WT | Adult | Leung et al., 2015 |
Hi-C | Human | Right ventricle | WT | Adult | Schmitt et al., 2016 |
PCHi-C | Human | iPSCs, iPSC-differentiated cells | WT | iPSC, iPSC-derived cardiomyocytes | Montefiori et al., 2018 |
PCHi-C | Human | ESCs, ESC-differentiated cells | WT | ESC-derived cardiomyocytes | Choy et al., 2018 |
PCHi-C | Human | Left ventricle | WT | adult | Jung et al., 2019 |
Hi-C | Human | ESCs, ESC-differentiated cells, iPSCs, iPSC-differentiated cells | WT | ESCs, iPSCs, mesoderm, cardiac progenitors, cardiomyocytes, fetal heart | Bertero et al., 2019 |
Hi-C | Human | ESCs, ESC-differentiated cells | WT | ESCs, mesodermal cells, cardiac mesodermal cells, cardiac progenitors, primitive cardiomyocytes, and ventricular cardiomyocytes | Zhang et al., 2019 |
Data from large consortiums (ENCODE, FANTOM, and Roadmap Epigenomics Projects) are not listed. Datasets are sorted by species first and then by publication dates.