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. 2021 Mar 11;11:650481. doi: 10.3389/fonc.2021.650481

Table 3.

The comparison of various ctDNA detection methods.

Type Technique Stability Sensitivity Cost Target Features
ARMS-based ARMS Mediate Low Low Single gene mutation Convenient, easy-operation
Super-ARMS Higher sensitivity than ARMS
dPCR-based ddPCR High High Low Single gene mutation Available for the clinic
BEAMing Definite ctDNA-quantification
NGS-based TAM-Seq High
(influenced by laboratory level)
High High Multiple gene mutations Less cost and time, and lower sensitivity than other NGS-based methods
Safe-SeqS Identification of rare genetic mutations
CAPP-Seq “Filter”; relatively high sensitivity
iDES Higher sensitivity than CAPP-Seq
TEC-Seq Deep sequencing; potential in the early-diagnosis when no symptoms occur
Mass spectrometry MassARRAY Mediate Mediate Multiple gene mutations Less range than NGS-based methods
Others EFIRM Mediate Low Multiple gene mutations Short time; easy-operation

ARMS, amplification refractory mutation system; PCR, polymerase chain reaction; ddPCR, droplet- based digital PCR; BEAMing, breads, emulsification, amplification and magnetics; TAM-Seq, tagged-amplicon sequencing; Safe-SeqS, safe sequencing system; CAPP-Seq, cancer personalized profiling by deep sequencing; iDES, integrated digital error suppression; TEC-Seq, targeted error correction sequencing; EFIRM, electric field-induced release and measurement.