TABLE 3.
Bases in seven positions within the 1,589-bp toxRS sequence of Vibrio parahaemolyticus strains.
| Strains | Base position in toxRS sequence (1,589 bp)a | toxRS typeb | Serotype (O:K)c | ||||||
| 576 | 900 | 1,002 | 1,196 | 1,214 | 1,244 | 1,463 | |||
| Cascavel | G | G | C | C | A | A | A | old | O5:K17 |
| IOC 17381 | A | A | T | T | T | A | T | new | O3:KUT |
| IOC 17384 | A | A | T | T | T | A | T | new | O3:KUT |
| IOC 20173 | G | G | C | C | A | G | A | old | O1:K25 |
| IOC 20142 | G | G | C | C | A | G | A | old | O1:KUT |
| IOC 20128 | G | G | T | T | T | G | A | hybrid | OUT:KUT |
| IOC 20138 | G | G | C | C | A | G | A | old | OUT:KUT |
| RIMD2210633 | A | A | T | T | T | A | T | new | O3:K6 |
| BB22OP | G | G | T | C | A | G | A | old | O4:K8 |
Vibrio parahaemolyticus reference strains for toxRSnew and toxRSold, respectively: pandemic RIMD2210633 and non-pandemic BB22OP.
Bases in the toxRSnew sequence that differ from those in toxRSold are in bold.
aThe seven bases in the toxRSnew sequence that differ from those in toxRSold are in bold.
They were numbered (576, 900, 1,002, 1,196, 1,214, 1,244, and 1,463) based on toxRS sequence of V. parahaemolyticus strain AQ3815 (Lin et al., 1993).
bThe toxRS types “old,” “new,” or “hybrid” are based on Matsumoto et al. (2000).
c“UT” stands for untypeable.