Table 1.
Solutions that can be prepared in advance and information about their treatment to achieve sterile and/or RNAse-free conditions
| REAGENT | Volume | Sterilization method | RNAse-free |
|---|---|---|---|
| 1 M Tris-HCl pH 6.8 | 1 L | Autoclave | DEPC water |
| 1 M Tris-HCl pH 7.5 | 1 L | Autoclave | DEPC water |
| 1 M Tris-HCl pH 9.5 | 1 L | Autoclave | DEPC water |
| 0.5 M EDTA pH 8 | 100 mL | Autoclave | DEPC water |
| 5 M NaCl | 500 mL | Autoclave | DEPC water |
| 1 M MgCl2 | 500 mL | n/a | n/a |
| 50% Dextran Sulfate | 50 mL | n/a | DEPC water |
| 100 mg/mL tRNA | 1 mL | n/a | DEPC water |
| 10% Acetic Acid | 20 mL | n/a | DEPC water |
| 10× in situ salts | 50 mL | Filter sterilize | DEPC water |
| 20× SSC pH 7 | 1 L | n/a | DEPC water |
| 10× PBS pH 7.4 | 1 L | Autoclave | n/a |
| 1× PBS pH 7.4 | 1 L | n/a | n/a |
| 50× TAE | 1 L | Autoclave | n/a |
| 1× TAE | 1 L | n/a | n/a |
| 1% (w/v) agarose in 1×TAE buffer | 500 mL | n/a | n/a |
| 50% Formamide | 50 mL | n/a | DEPC water |
| Hybridization solution | 40 mL | n/a | DEPC water |
| 15, 30, 50, 70, 80, 90% ethanol | 500 mL each | n/a | n/a |
| 25, 50, 75, 100% Histo-Clear in ethanol | 500 mL each | n/a | n/a |
| LB-Carbenicillin plates | n/a | n/a | n/a |
Specific recipes for each reagent are found under “materials and equipment”.