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. 2021 Mar 26;16(3):e0248775. doi: 10.1371/journal.pone.0248775

Table 1. Summary of studies comparing KRAS/All-RAS mutation status in cfDNA and tumor tissue samples from colorectal cancer patients.

Author, year Sample size Technique used for cfDNA samples Sample type for cfDNA Technique used for tissue samples Region of the study Type of colorectal caner
Bidard et al, 2019 [48] 125 digital droplet PCR (Bio-Rad) Plasma standard routine technique Europe metastatic
Sclafani et al, 2018 [49] 90 digital droplet PCR (Bio-Rad) Plasma PCR & Sanger sequencing Europe primary
Kang et al, 2020 [13] 48 NGS (customized panel) Plasma Sanger sequencing Asia metastatic
Kato et al, 2019 [19] 76 NGS (Guardant360, Guardant Health) Plasma NGS (Foundation One, Foundation Medicine) America either primary or metastatic
Chang et al, 2018 [29] 5 NGS (275-gene panel from Qiagen) Plasma NGS (275-gene panel from Qiagen) Asia either primary or metastatic
Garcia et al, 2018 [30] 28 Beads, Emulsion, Amplification and Magnetics (BEAMing) (OncoBEAM-RAS-CRC kita) Plasma NGS (customized Ampliseq library,) Europe metastatic
Wang et al, 2017 [31] 97 NGS (commercial panel from SinoMD) Plasma standard routine technique Asia metastatic
Kidess-Sigal et al, 2016 [50] 3 NGS (SCODAb mutation enrichment and detection technology) Plasma Sanger sequencing America metastatic
Kim et al, 2015 [32] 29 NGS (Guardant360, Guardant Health) Plasma Sanger sequencing Asia metastatic
Vessies et al, 2020 [33] 6 BEAMing (OncoBEAM-RAS-CRC kita) Plasma standard of care Europe metastatic
Cao et al, 2020 [34] 35 NGS (customized 605-gene panel) Plasma NGS (whole exome sequencing) Asia either primary or metastatic
Gupta et al, 2020 [35] 75 NGS (Guardant360, Guardant Health) Plasma NGS (Foundation One, Foundation Medicine) America metastatic
Kitagawa et al, 2019 [14] 40 digital droplet PCR (Bio-Rad) Serum ARMS or Luminex Asia either primary or metastatic
Galbiati et al, 2019 [51] 20 digital droplet PCR (Bio-Rad) Plasma MassARRAY (Sequenom) Europe metastatic
Choi et al, 2019 [36] 61 NGS (Guardant360, Guardant Health) Plasma NGS (Foundation One, Foundation Medicine) America either primary or metastatic
Liebs, et al, 2019 [18] 53 digital droplet PCR (Bio-Rad) Plasma digital droplet PCR (Bio-Rad) Europe either primary or metastatic
Osumi et al, 2019 [37] 101 NGS (Oncomine Colon cfDNA assay) Plasma PCR (RASKET KIT, Luminex) Asia metastatic
Galbiati et al, 2019 [52] 30 digital droplet PCR (Bio-Rad) Plasma MassARRAY (Sequenom) Europe metastatic
Takayama et al, 2018 [53] 85 digital droplet PCR (Bio-Rad) Plasma ARMS/PCR (RASKET kit) Asia metastatic
Yao et al, 2018 [38] 64 NGS (Sureselect, Agilent, targeting KRAS/NRAS/HRAS/BRAF) Plasma ARMS (Human KRAS/NRAS/BRAF mutations detection kitc) Asia metastatic
Sun et al, 2018 [39] 11 NGS (customized 85-gene colorectal cancer gene panel) Plasma NGS (customized 85-gene colorectal cancer gene panel) Asia either primary or metastatic
Normanno et al, 2018 [40] 92 BEAMing (OncoBEAM-RAS-CRC kita) Plasma NGS (AmpliSeq Colon and Lung Cancer Panel, ThermoFisher) Europe metastatic
Garcia-Foncillas et al, 2018 [41] 236 BEAMing (OncoBEAM-RAS-CRC kita) Plasma standard of care (Pyrosequencing/Cobas/Therascreen/Idylla/CLART-CMA kit) Europe metastatic
Beije et al, 2016 [42] 12 NGS (customized 21-gene CRC-specific panel) Plasma NGS (customized 21-gene CRC-specific panel) Europe metastatic
Sefrioui et al, 2017 [54] 29 QuantStudio 3D digital PCR Plasma SNaPshot multiplex assay Europe metastatic
Grasselli et al, 2017 [43] 117 BEAMing (OncoBEAM-RAS-CRC kita) Plasma BEAMing (OncoBEAM-RAS-CRC kita) Europe metastatic
Schmiegel et al, 2017 [44] 98 BEAMing (OncoBEAM-RAS-CRC kita) Plasma standard of care (Pyrosequencing/Sanger sequencing/NGS) Europe metastatic
Vidal et al, 2017 [45] 115 BEAMing (OncoBEAM-RAS-CRC kita) Plasma standard of cared Europe metastatic
Beranek et al, 2016 [47] 32 NGS (Somatic 1e) Plasma Standard routine technique Europe metastatic
Rachiglio et al, 2016 [46] 35 NGS (22-gene Oncomine Solid Tumor DNA kit, Life Technologies) Plasma Pyrosequencing (Therascreen KRAS and NRAS Pyro kit, Qiagen) Europe metastatic
Yamada et al, 2016 [55] 94 QuantStudio 3D digital PCR Plasma MEBGEN-Luminex method Asia metastatic
Spindler et al, 2015 [20] 211 ARMS-based in-house assay Plasma ARMS-based in-house assay Europe metastatic
Taly et al, 2013 [12] 50 picodroplet digital PCR Plasma quantitative PCR Europe metastatic

aFrom Sysmex Inostics, which targets 34 variants in KRAS and NRAS genes.

bSequence-specific synchronous coefficient of drag alteration.

cFrom Beijing ACCB Biotech, which targets KRAS/NRAS codons 12, 13, 59, 61, 117, 146, and BRAF codon 600.

dTherascreen KRAS RGQ PCR kit (Qiagen), COBAS KRAS mutation test (Roche), or pyrosequencing (PyroMark, Qiagen).

eFrom Multiplicom, Belgium, which targets BRAF, KRAS, and NRAS.