Fig 3. SARS-CoV-2 frequently observed mutations.

29 mutations along the SARS-CoV-2 genome occurred in >2% of the 372 Israeli sequences. (A) Correlation table of the frequently observed mutations. Positive/negative correlations are denoted in blue/red respectively. Known clade-defining mutations are underlined and clade association is noted. (B) Listed for each frequently observed mutation its position, gene, % frequency in Israeli sequences, nucleotide substitution, whether it’s an R or S mutation, and in case of an R mutation, the originating and altered AA group. Known clade-defining mutations are highlighted in grey.