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. 2021 Mar 2;10:e64618. doi: 10.7554/eLife.64618

Figure 5. Viral lineage compositions in care home and non-care home samples.

Plots showing the ratios of SARS-CoV-2 viral lineages for 700 care home resident genomes (A) and a randomly selected subset of 700 non-care home residents (B). The proportion of lineage B.1.1 increased over the study period in both care home and non-care home residents. Lineages defined using pangolin. Data also presented in Table 5.

Figure 5.

Figure 5—figure supplement 1. Viral lineage compositions in care home and non-care home samples by count.

Figure 5—figure supplement 1.

Plots showing the counts of SARS-CoV-2 viral lineages for 700 care home resident genomes (A) and a randomly selected subset of 700 non-care home residents (B). Lineages defined using pangolin. Data also presented in Table 5.
Figure 5—figure supplement 2. Distribution of pairwise SNP differences between care home samples.

Figure 5—figure supplement 2.

Pairwise SNP differences between the 700 care home residents (244,650 comparisons). There was a median of eight single nucleotide polymorphisms (SNPs) separating care home genomes (interquartile range, IQR 6–12, range 0–29), compared to 9 (IQR 5–13, range 0–28) for randomly selected non-care home samples (p=0.95, Wilcoxon rank sum test).