Table 3.
Phylum/Genus | G60CON | G60FFM | p | FDR | L7CON | L7FFM | p | q |
---|---|---|---|---|---|---|---|---|
Firmicutes | 51.89 ± 3.01 | 53.26 ± 1.92 | NS | NS | 79.89 ± 2.00 | 72.93 ± 2.43 | 0.047 | NS |
Christensenellaceae_R-7_group | 13.53 ± 1.88 | 9.51 ± 1.6 | NS | NS | 23.2 ± 2.45 | 21.86 ± 2.44 | NS | NS |
Ruminococcaceae_UCG-002 | 8.34 ± 0.57 | 7.4 ± 0.61 | NS | NS | 9.31 ± 1.56 | 8.72 ± 0.92 | NS | NS |
unclassified_f_Lachnospiraceae | 5.08 ± 0.41 | 4.46 ± 0.34 | NS | NS | 8.17 ± 1.48 | 5.14 ± 0.95 | NS | NS |
Lactobacillus | 2.14 ± 0.29 | 3.24 ± 0.78 | NS | NS | 4.15 ± 1.08 | 4.32 ± 0.97 | NS | NS |
Ruminococcaceae_NK4A214_group | 1.95 ± 0.27 b | 2.71 ± 0.15 a | 0.03 | NS | 3.66 ± 0.35 | 4.41 ± 0.44 | NS | NS |
Ruminococcaceae_UCG-005 | 2.41 ± 0.43 b | 4.13 ± 0.4 a | 0.01 | 0.07 | 3.92 ± 0.41 | 4.9 ± 0.42 | NS | NS |
Ruminococcaceae_UCG-014 | 2.65 ± 0.5 | 1.91 ± 0.14 | NS | NS | 3.81 ± 0.59 | 3.3 ± 0.48 | NS | NS |
unclassified_f_Ruminococcaceae | 1.15 ± 0.14 | 1.53 ± 0.18 | NS | NS | 1.77 ± 0.04 | 1.85 ± 0.22 | NS | NS |
Ruminococcaceae_UCG-010 | 0.94 ± 0.12 | 0.82 ± 0.05 | NS | NS | 0.89 ± 0.11 | 0.99 ± 0.08 | NS | NS |
Family_XIII_AD3011_group | 0.81 ± 0.05 b | 1.68 ± 0.26 a | 0.01 | 0.046 | 2.19 ± 0.23 | 1.38 ± 0.18 | 0.02 | NS |
Candidatus_Soleaferrea | 0.6 ± 0.17 | 0.5 ± 0.05 | NS | NS | 1.03 ± 0.16 a | 0.53 ± 0.13 | 0.03 | NS |
Ruminococcaceae_UCG-013 | 0.48 ± 0.06 b | 0.63 ± 0.04 a | 0.047 | 0.15 | 0.38 ± 0.05 | 0.46 ± 0.11 | NS | NS |
Clostridium_sensu_stricto_1 | 0.44 ± 0.1 | 0.44 ± 0.09 | NS | NS | 0.88 ± 0.11 | 0.59 ± 0.13 | NS | NS |
Lachnospiraceae_AC2044_group | 0.59 ± 0.09 | 0.98 ± 0.1 | 0.01 | 0.07 | 0.67 ± 0.08 | 0.41 ± 0.1 | 0.07 | NS |
Ruminiclostridium_6 | 0.46 ± 0.1 | 0.29 ± 0.04 | NS | NS | 0.47 ± 0.11 | 0.49 ± 0.06 | NS | NS |
Bacteroidetes | 27.8 ± 2.35 | 34.6 ± 1.34 | 0.03 | 0.13 | 7.02 ± 0.78 | 6.95 ± 0.86 | NS | NS |
Rikenellaceae_RC9_gut_group | 6.71 ± 0.81 | 7.18 ± 0.44 | NS | NS | 1.62 ± 0.43 | 0.77 ± 0.07 | 0.07 | NS |
Prevotellaceae_NK3B31_group | 3.98 ± 0.54 | 4.09 ± 0.42 | NS | NS | 0.79 ± 0.14 | 1.33 ± 0.18 | 0.04 | NS |
norank_f_p-2534-18B5_gut_group | 1.6 ± 0.58 | 2.89 ± 0.69 | NS | NS | 0.16 ± 0.04 | 0.36 ± 0.08 | 0.04 | NS |
norank_f_Muribaculaceae | 3.24 ± 0.66 | 4.31 ± 0.55 | NS | NS | 1.99 ± 0.69 | 2.44 ± 0.43 | NS | NS |
Prevotellaceae_UCG-001 | 2.45 ± 0.56 b | 6.69 ± 0.32 a | <0.001 | <0.001 | 0.37 ± 0.16 | 0.10 ± 0.05 | NS | NS |
Prevotella_1 | 1.44 ± 0.28 | 1.9 ± 0.25 | NS | NS | 0.2 ± 0.04 | 0.31 ± 0.06 | NS | NS |
Parabacteroides | 2.2 ± 0.39 a | 0.16 ± 0.02 b | <0.001 | 0.01 | 0.37 ± 0.09 | 0.14 ± 0.03 | 0.03 | NS |
Bacteroides | 2.61 ± 0.59 | 1.36 ± 0.43 | NS | NS | 0.2 ± 0.06 | 0.08 ± 0.01 | 0.07 | NS |
Spirochaetes | 10.67 ± 1.93 | 6.31 ± 0.72 | NS | NS | 3.19 ± 0.75 | 3.66 ± 0.94 | NS | NS |
Treponema_2 | 10.49 ± 1.96 | 6.11 ± 0.69 | NS | NS | 3.13 ± 0.75 | 3.6 ± 0.94 | NS | NS |
Proteobacteria | 2.87 ± 0.49 | 1.82 ± 0.39 | NS | NS | 2.58 ± 0.76 | 5.85 ± 1.39 | 0.06 | NS |
Escherichia-Shigella | 1.88 ± 0.48 a | 0.83 ± 0.35 b | 0.06 | NS | 2.46 ± 0.77 | 5.71 ± 1.35 | 0.06 | NS |
a, b Means within rows with different superscript letters are significantly different (p < 0.05 or q < 0.05). n = 7 for each group. G60SCON = CON sows on G60; G60SFFM = FFM sows on G60; L7SCON = CON sows on G7; L7SFFM = FFM sows on L7; NS= No Statistic.