Table 2.
Reference strains of aquabirnavirus used in this study.
| Isolates | Genogroups | Host a | Origin | Accession no. |
|---|---|---|---|---|
| Jasper | I | Trout | Canada | NC_001915 |
| WZ2016 | I | Rainbow trout | China | KX355401 |
| Mexican | I | Rainbow trout | Mexico | JX174178 |
| MICH2-CSM-06 | I | Rainbow trout | Mexico | MH708130 |
| MICH3-CSM-07 | I | Rainbow trout | Mexico | MH708131 |
| PUE2-CSM-06 | I | Rainbow trout | Mexico | MH708127 |
| PUE3-CSM-06 | I | Rainbow trout | Mexico | MH708128 |
| IHJSI | I | Rainbow trout | Chile | KF954926 |
| IHJS3 | I | Rainbow trout | Chile | KF954927 |
| 25227 | I | Coho salmon | Chile | KU609573 |
| 114 | I | Trout | America | AY026348 |
| 93 | I | Trout | America | AY026346 |
| AM-98 | I | Amago salmon | Japan | AY283780 |
| VR299 | I | Trout | America | AF343572 |
| Buhl | I | Trout | America | AF343573 |
| Reno | I | Trout | America | AY026345 |
| 11 | I | Trout | America | AY026347 |
| 91-137 | I | Trout | America | AF343570 |
| 5B1d | I | Atlantic cod | Spain | AY780918 |
| 17F2 | I | Greenland halibut | Spain | AY780920 |
| 19F3b | I | Greenland halibut | Spain | AY780921 |
| 20G1d | I | Deepwater redfish | Spain | AY780924 |
| 19G3e | I | Deepwater redfish | Spain | AY780922 |
| 578 | II | Turbot | Spain | AJ489228 |
| 2290 | II | Salmon | Spain | AJ489224 |
| Canada 1 | III | Trout | Canada | AF342731 |
| Canada 2 | IV | trout | Canada | AF342733 |
| Canada 3 | IV | Arctic char | Canada | AF342734 |
| Mar88 b | V | Rainbow trout | Italy | MG543567 |
| Oct11 c | V | Rainbow trout | Italy | MG543599 |
| Antalya | V | Rainbow trout | Turkey | MH614927 |
| Hatay | V | Rainbow trout | Turkey | MH614926 |
| 666/12 | V | Rainbow trout | Finland | KY548515 |
| NVI-023 | V | Rainbow trout | Norway | AY379737 |
| Sp | V | Trout | Taiwan | U56907 |
| Sp | V | Rainbow trout | Iran | KF279643 |
| 1375/89 | VI | Salmo trutta | Finland | KY548508 |
| 94/01 | VI | Salmo salar | Finland | KY548509 |
| He | VI | Pike | Germany | AF342730 |
| Y-6 | VII | Yellowtail | Japan | AY283781 |
| YT-01A | VII | Yellowtail | Japan | AY283782 |
| NC1 | VII | Flounder | South Korea | AY283784 |
| POBV | VII | Japanese flounder | China | EU161285 |
a Trout: the specific species unknown; Latin names of hosts are as follows: rainbow trout, Oncorhynchus mykiss; Coho salmon, Oncorhynchus kisutch; Amago salmon, Oncorhynchus masou ishikawae; Atlantic cod, Gadus morhua; Greenland halibut, Reinhardtius hippoglossoides; deepwater redfish, Sebastes mentella; Arctic char, Salvelinus alpinus; turbot, Scophthalmus maximus; brown trout, Salmo trutta; Pike, Esox lucius L.; yellowtail, Seriola quinqueradiata; flounder, Platichthys flesus; Japanese flounder, Paralichthys olivaceus. b The full name of Italy strain Mar88 was IPNV/O. mykiss/I/PN/208/Mar88. c The full name of Italy strain Oct11 was IPNV/O. mykiss/I/TN/394/Oct11.