Table 2.
Diversity of Listeria spp. sigB allelic types (AT) in agricultural water and fecal samples.
Sample Type | No. of Listeria spp.a | No. of ATs | Estimated Subtype Richness (95% CI)b,c | Simpson’s Index (95% CI)c | Effective No. of ATd | |
---|---|---|---|---|---|---|
Fecal | - | 11 | 8 | 35 (8, 2871) | 0.84 (0.75, 0.94) | 6 |
Water | - | 39 | 14 | 23 (14, 259) | 0.84 (0.76, 0.92) | 6 |
Pond | 25 | 11 | 32 (11, 1445) | 0.79 (0.67, 0.92) | 5 | |
Stream | 14 | 8 | 11 (8, 39) | 0.84 (0.76, 0.91) | 6 |
Excluding L. monocytogenes
Estimated using weighted linear regression
95% CI: 95% confidence interval
Effective number of AT is calculated based on Simpson’s Index of Diversity