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. 2021 Mar 12;10(3):632. doi: 10.3390/cells10030632

Table 1.

Techniques utilized to measure de novo protein synthesis in neurites.

Protein metabolic labeling Technique Label Detection References
BONCAT/
FUNCAT
Noncanonical aminoacids (azide or alkyne) Covalent cycloaddition reaction with fluorescently tagged or biotinylated reactive group (alkyne or azide) [18,19]
SILAC/
pSILAC
Stable isotope Mass spectrometry [20,21]
Puromycilation of nascent peptides SUnSET/
PUNCH-P
tRNA analogue puromycin; biotinylated puromycin Puromycin immunodetection; biotin-streptavidin conjugation; mass spectrometry following purification of tagged peptides [22,23,24,25,26]
Translatomic approach TRAP/
Ribo-Seq
Epitope-tagged ribosome Epitope immunoprecipitation followed by mRNA purification and detection by RNA-Seq [27,28]