Table 1.
Cell Types | Region Tested | Methylation Status | Reference |
---|---|---|---|
SUSM-1, CMV, SiHA, MDA-231/435, Calu 1/3/6, HTB 57/178/182, SW480, HTC 116 (Telomerase +) | From −500 UTSS to +50 first exon (72 CpG sites) | Partial or total methylation | [124] |
A549, HTB183 (Telomerase +) NHF, MRC-5/p27 (Telomerase −) |
From −500 UTSS to +50 first exon (72 CpG sites) | Unmethylated | [124] |
U2OS, telomerase-negative breast carcinoma, VA13 GM847 | Promoter region | Partial or total methylation | [127] |
CT1485 (Telomerase +) WI38, HA-1 pre-crisis cell strain, JFCF-6T/5K pre-crisis cell strain, IMR90, BJ fibroblast, adrenal carcinoma (Telomerase −) |
Promoter region | Unmethylated | [127] |
J82, T24, MCF-7, A431, HeLa, Co115, HT29, SW480, H520, SW2, PC-3, | 27 CpG sites −441 to −218 relative to UTSS |
Partial or total hypermethylation and correlation with TERT mRNA expression and telomerase activity | [17] |
Tumour tissues from brain, breast, bladder, colon, kidney, lung, soft tissue | |||
Saos-2, U2-OS (Telomerase −) | 27 CpG sites −441 to −218 relative to UTSS |
Partial or total hypermethylation | [17] |
Normal tissues; skin, brain, bladder, muscle, kidney, heart, placenta, testis, colon | Unmethylation and telomerase negative | ||
HeLa, SW480, Tumour tissues (breast, bladder and cervix) (Telomerase +) | −100 to +100 | 75 to 100% methylation | [131] |
−165 to −100 | 0 to 55% methylation | ||
BJ fibroblasts (Telomerase −) | −165 to +100 relative to UTSS |
3 to 23% hypomethylation | [131] |
Caco-2, HCT116, RKO, SW480, MCF7, MDA-MB-231, MDA-MB-435S, MDA-MB-453, H82, H157, H209, H146, H358, H417, H549, H747, H1299, U1752, DMS53, HL-60, KG-1a, Jurkat, Raji, LCL | −600 bp relative to UTSS | Partial or total methylation and TERT expression |
[136] |
−150 to +150 relative to UTSS |
Partial or unmethylation | ||
Hepatocarcinoma cell lines HepG2, SNU-182, SNU-398, HCC Tissue (Telomerase +) |
−165 to +49 relative to UTSS | 10 HCC clones and HepG2 Hypo/unmethylated 12 HCC clones and SNU-182, SNU-398 hypermethylated and reduced TERT |
[137] |
Normal liver tissue (Telomerase −) | −165 to +49 relative to UTSS | Hypermethylated and reduced TERT | [137] |
Malignant pediatric brain tumours | 5 CpG sites located UTSS | Hypermethylation TERT expression | [128] |
Neuroblastoma | UTSS | Highly methylated | [120] |
Hepatocellular carcinoma | −452 to −667 and −974 to −1419 relative to UTSS | Hypermethylation and high TERT expression | [138] |
Gastric cancer | 25 CpG sites located −555 from UTSS | Hypermethylation and high TERT expression | [134] |
Haematopoietic cell lines including Jurkat, THP1, K562, cervical cancer and embryonic kidney cells | −60 to +20 relative to ATG | Hypermethylation and TERT expression |
[117] |
Normal peripheral blood cell populations (granulocytes, T cells, B cells and monocytes) | −60 to +20 relative to ATG | Unmethylated | [117] |
Acute myeloid leukaemia, myelodysplastic syndrome | −520 to −400 relative to ATG | Hypermethylation | [117] |
Thyroid cancer | −541 to −578 relative to ATG | Hypermethylation | [139] |
Prostate cancer | 52 CpG –140 to –572 relative to the UTSS | Hypermethylation | [140] |
Melanoma | 26 CpG –482 to –667, relative to the ATG | Hypermethylation and positively correlated with the TERT expression | [141] |
Melanoma | −945 to −669 bp relative to UTSS | Hypermethylation and positively correlated with the TERT expression | [142] |
Pancreatic cancer | Position –575 relative to the UTSS | Hypermethylation | [143] |
Colon, blood, breast, prostate, brain, lungs, bladder, ovaries, bone, skin cancers | 52 CpG sites −100 to −600 located UTSS | Hypermethylation and upregulated TERT expression | [129] |
Bladder cancers | 5 CpG sites in –140 to –572 region relative to UTSS | Hypermethylation and higher TERT expression | [132,144] |
Primary metastatic medulloblastoma | 5 CpG sites localized −600 bp UTSS region | Hypermethylation | [145] |
Thyroid Cancer Cell Lines | −662 to +174 relative to UTSS | Hypermethylation of upstream promoter and correlated with TERT expression | [146] |