| MQA | Model Quality Assessment |
| P3CMQA | Profile-based three-dimensional Convolutional neural network for protein structure Model Quality Assessment |
| GDT_TS | Global Distance Test Total Score |
| lDDT | Local Distance Diferrence Test |
| PSSM | Position Specific Scoring Matrix |
| SS | Secondary Structure |
| RSA | Relative Solvent Accessibility |