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. 2021 Mar 19;7(3):228. doi: 10.3390/jof7030228

Table 1.

Characteristics of the DNA extraction methods. The DNA extract measured by Nanodrop is expressed as a mean concentration (±standard deviation) C: chemical; M: mechanical; E: enzymatic; LB: NucliSENSTM easyMAGTM lysis buffer (BioMérieux, Marcy-l’Etoile, France); CB; ceramic beads; Ly: lyticase; PK: proteinase K; BALF: broncho-alveolar lavage fluid, DNA: deoxyribonucleic acid; RNA: ribonucleic acid.

Method Kit Company Automate Validated Sample Validated Material Nucleic Acids Pretreatment Sample Volume Expected Elution Volume Observed Elution Volume Elution Appearance DNA Quantification (ng/µL)
C M E
1 NucliSENSTM EasyMAGTM BioMérieux NucliSENS EasyMAG Human Whole blood, serum, plasma, stools, respiratory samples and other body fluids. DNA/RNA LB CB - 200 µL 110 µL 110 µL Clear 27.0 (±6.6)
2 EZ1TM DNA Blood 200 µL Kit Qiagen EZ1 Human Whole blood DNA - - - 200 µL 100 µL 100 µL Clear 30.5 (±5.5)
3 EZ1TM DNA Blood 200 µL Kit + pretreatment Qiagen EZ1 Human Whole blood DNA LB CB - 200 µL 100 µL 100 µL Clear 10.4 (±2.7)
4 EZ1TM DNA Tissue Kit + pretreatment Qiagen EZ1 Human Whole dried blood, tissue, buccal cells, cultured cells, Paraffin-Embedded Tissue DNA - - Ly 200 µL 100 µL 100 µL Clear 30.3 (±3.3)
5 QIAamp 96 DNA QIAcube HT Kit Qiagen QIAcube Human Whole blood, tissue, cells DNA - - PK 200 µL 120 µL 120 µL Red tinted 30.2 (±6.6)
6 Macherey-Nagel™ Pathogène NucleoMag™ Fisher Scientific KingFisher Human Whole blood, serum, plasma; tissue (e.g., ear notches); feces; swab wash solution DNA/RNA - - PK 150 µL 80 µL 80 µL Clear 30.2 (±7.9)
7 Mag-BindTM Viral DNA/RNA Omega Bio-tek KingFisher Human Whole blood, serum, plasma, saliva, and other body fluids. DNA/RNA - - PK 200 µL 100 µL 100 µL Clear 84.5 (±29.0)
8 MagMAX™ Viral/Pathogen Nucleic Acid Isolation Kit Applied Biosystems MGISP-960 Human Whole blood, swabs, urine, and viral transport media DNA/RNA - - PK 400 µL 100 µL 100 µL Red tinted 32.2 (±35.3)
9 Chemagic Viral DNA/RNA 300 kit H96 PerkinElmer Chemagic 360 Human Serum, plasma, saliva, nasal or oral swab, BALF DNA/RNA - - PK 300 µL 100 µL 100 µL Red tinted 17.8 (±19.5)
10 Virus DNA/RNA Extraction kit MGI MGISP-960 Human Serum, plasma, saliva, virus culture medium, throat swabs, BALF, sputum DNA/RNA - - PK 200 µL 100 µL 25 µL Clear 61.3 (±42.6)
11 BioextractTM SuperballTM Biosellal KingFisher Veterinary Whole blood, milk, serum, organs DNA/RNA - - PK 200 µL 100 µL 100 µL Clear 13.9 (±2.8)