Table A3.
Significant polymorphisms, control populations, day 28.
| Gene | Mutation | Annotation | C1 | C2 | C3 | C4 | C5 |
|---|---|---|---|---|---|---|---|
| ftsW→ | C→T | I377I (ATC→ATT) | 0.000 | 0.000 | 0.000 | 0.269 | 0.000 |
| mhpR← | G→A | R193C (CGC→TGC) | 0.000 | 0.295 | 0.000 | 0.000 | 0.000 |
| stfE← | C→G | pseudogene (1/501 nt) | 0.000 | 0.000 | 0.414 | 0.000 | 0.000 |
| yddH←/→nhoA | A→T | intergenic (−148/−25) | 0.000 | 0.000 | 0.366 | 0.000 | 0.000 |
| yejH→/→rplY | A→T | intergenic (+5/−120) | 0.000 | 0.441 | 0.000 | 0.000 | 0.000 |
| yejH→/→rplY | C→A | intergenic (+42/−83) | 0.000 | 0.443 | 0.000 | 0.000 | 0.000 |
| tktB→ | C→T | P369L (CCG→CTG) | 0.000 | 0.000 | 0.000 | 0.000 | 0.368 |
| ygeY→ | T→C | F233L (TTC→CTC) | 0.000 | 0.000 | 0.000 | 0.287 | 0.000 |
| xdhD→ | C→T | T878M (ACG→ATG) | 0.000 | 0.286 | 0.000 | 0.000 | 0.000 |
| treF→/←yhjB | A→G | intergenic (+14/+37) | 0.000 | 0.000 | 0.000 | 0.000 | 0.303 |
| pyrE←/←rph | Δ1 bp | intergenic (−41/+25) | 0.250 | 0.000 | 0.000 | 0.000 | 0.429 |
| rpoB→ | C→T | H526Y (CAC→TAC) | 0.000 | 0.000 | 0.000 | 0.540 | 0.000 |
| rpoB→ | C→T | S712F (TCC→TTC) | 0.000 | 0.000 | 0.000 | 0.000 | 0.259 |
| rpoB→ | G→A | E848K (GAA→AAA) | 0.000 | 0.000 | 0.000 | 0.359 | 0.000 |
| rpoB→ | G→T | Q1017H (CAG→CAT) | 0.000 | 0.328 | 0.000 | 0.000 | 0.000 |
| rpoC→ | +TCT | coding (2012/4224 nt) | 0.427 | 0.000 | 0.000 | 0.000 | 0.000 |