Skip to main content
. Author manuscript; available in PMC: 2021 Mar 29.
Published in final edited form as: Annu Rev Genomics Hum Genet. 2020 May 26;21:139–162. doi: 10.1146/annurev-genom-120219-080406

Figure 2:

Figure 2:

Visualizing a graph of GRCh38 and its alternate sequences in the gene HLA-DRB1 built with VG msga (48). Top: Bandage’s force directed layout reveals large scale structures (142). Top middle: ODGI viz’s binned, linearized rendering of the paths (colored bars) versus the sequence and topology of the graph (below). Bottom middle: A fragment of VG viz’s linearized rendering, showing base-level detail. Bottom: The same fragment rendered with the Sequence Tube Map (13). Dashed lines show correspondence between the visualizations. Path colors are assigned independently by each method.