Table 2.
Assembly statistics for final assembly, ARS-UCSC_bison1.0, and current bison reference, Bison_UMD1.0
| ARS-UCSC_bison1.0 | Bison_UMD1.0 | ||
|---|---|---|---|
| Genome size (Gb) | 2.65 | 2.83 | |
| Contig number | 839 | 470 415 | |
| Scaffold number | 775 | 128 431 | |
| Contig N50 | 68.5 Mb | 20.0 Kb | |
| Scaffold N50 | 87.8 Mb | 6.87 Mb | |
| Scaffold L50 | 11 | 124 | |
| Gaps (in chromosomes) | 64 (49) | 341,984 (NA) | |
| Largest contig | 136.1 Mb | 203.8 Kb | |
| BUSCO (%) | Complete | 88.6 | 85.6 |
| Duplicated | 1.0 | 0.9 | |
| Fragmented | 2.4 | 3.9 | |
| Missing | 8.0 | 9.6 | |
| K-mer statistics | K-mer-based QV | 38.88 | 32.21 |
| K-mer completeness | 91.35% | 93.0% |