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. 2021 Mar 30;12:1964. doi: 10.1038/s41467-021-21226-z

Fig. 3. Layered Manhattan plot for smoking initiation (SmkInit) phenotype.

Fig. 3

Each vertical line represents a SNP analyzed by the MAMBA, where the line extends to a purple cross indicating the fixed-effects p-value. Orange triangles on the same line indicate the MAMBA p-values for the same SNP. Green points are the p-values for randomly pruned markers included in the MAMBA model to ensure that both non-replicable and replicable associations are incorporated. P-values for the MAMBA model were calculated through a bootstrap procedure. All p-values are two-sided and not adjusted for multiple comparisons. Source data are provided as a Source Data file.