TABLE 1.
Genome assembly summary statistics of the Botryosphaeriaceae species analyzed.
Species (isolate ID) | Isolated from | Assembly size (Mbp) | N. scaffold | N50 (kbp) | L50 (Scaffold #) | CEGMA*** | BUSCO*** |
Botryosphaeria dothidea (0053) | Grape | 46 | 2,425 | 506 | 28 | 99% | 98% |
Diplodia mutila (SBen820) | Grape | 46 | 4,003 | 175 | 67 | 98% | 98% |
Diplodia seriata (DS831)* | Grape | 37 | 811 | 301 | 39 | 98% | 98% |
Dothiorella iberica (Wolf833) | Apricot | 37 | 636 | 412 | 28 | 97% | 98% |
Dothiorella sarmentorum (SBen806) | Apricot | 42 | 1,664 | 242 | 57 | 97% | 98% |
Dothiorella viticola (Wint804) | Grape | 37 | 2,477 | 482 | 25 | 98% | 98% |
Lasiodiplodia citricola (06I-35) | Walnut | 44 | 216 | 1,067 | 13 | 97% | 98% |
Lasiodiplodia exigua (UCR-LT5) | Grape | 44 | 340 | 720 | 15 | 98% | 98% |
Lasiodiplodia missouriana (09-C092) | Grape | 44 | 324 | 883 | 17 | 98% | 98% |
Lasiodiplodia theobromae (MXBCL28) | Grape | 44 | 193 | 883 | 16 | 99% | 98% |
Neofusicoccum australe (UCR-NA2) | Grape | 42 | 2,218 | 385 | 35 | 99% | 98% |
Neofusicoccum hellenicum (02-K91) | Pistachio | 43 | 221 | 768 | 19 | 98% | 98% |
Neofusicoccum mediterraneum (Wint817) | Grape | 42 | 196 | 551 | 24 | 99% | 98% |
Neofusicoccum nonquaesitum (05-A04) | Walnut | 43 | 316 | 667 | 19 | 99% | 98% |
Neofusicoccum parvum (UCD646So)** | Grape | 43 | 2,452 | 168 | 74 | 99% | 98% |
Neofusicoccum vitifusiforme (05-H02) | Walnut | 42 | 288 | 506 | 24 | 98% | 98% |
Neoscytalidium dimidiatum (UCR-Neo1) | Grape | 42 | 478 | 419 | 31 | 100% | 98% |
*Published in Morales-Cruz et al., 2015. **Published in Massonnet et al., 2018. ***Percentage of complete CEGMA and BUSCO peptides found in the genome assembly.