TABLE 2.
Species | Repeat content (bp) | N. CDS | Mean protein size (AA) | BUSCO* | Mean gene density (genes/10 kbp) | SD |
Botryosphaeria dothidea | 2,608,021 (5.67%) | 12,424 | 478 | 98% | 2.14 | 1.9 |
Diplodia mutila | 2,877,891 (6.28%) | 11,947 | 491 | 98% | 1.74 | 1.9 |
Di. seriata | 1,144,284 (3.05%) | 11,085 | 495 | 98% | 2.93 | 1.8 |
Dothiorella iberica | 1,350,049 (3.69%) | 10,827 | 491 | 98% | 3.02 | 1.8 |
Do. sarmentorum | 1,687,353 (4.02%) | 13,942 | 474 | 98% | 2.90 | 2.5 |
Do. viticola | 950,252 (2.60%) | 11,235 | 473 | 98% | 2.19 | 1.9 |
Lasiodiplodia citricola | 825,529 (1.89%) | 12,376 | 492 | 98% | 3.19 | 1.4 |
L. exigua | 771,071 (1.77%) | 12,399 | 492 | 98% | 3.12 | 1.5 |
L. missouriana | 833,148 (1.89%) | 12,448 | 494 | 98% | 3.12 | 1.5 |
L. theobromae | 820,166 (1.88%) | 12,434 | 493 | 98% | 3.20 | 1.4 |
Neofusicoccum australe | 2,055,816 (4.92%) | 12,104 | 488 | 98% | 2.29 | 1.9 |
Neof. hellenicum | 1,078,449 (2.53%) | 12,433 | 486 | 98% | 3.27 | 1.4 |
Neof. mediterraneum | 960,302 (2.26%) | 12,541 | 484 | 98% | 3.36 | 1.4 |
Neof. nonquaesitum | 1,010,201 (2.35%) | 12,602 | 487 | 98% | 3.24 | 1.5 |
Neof. parvum | 2,170,098 (5.00%) | 12,679 | 485 | 98% | 2.27 | 1.9 |
Neof. vitifusiforme | 1,405,151 (3.37%) | 12,112 | 485 | 98% | 3.22 | 1.5 |
Neoscytalidium dimidiatum | 1,099,801 (2.61%) | 11,067 | 478 | 98% | 3 | 1.5 |
*Percentage of complete BUSCO peptides found in the predicted proteome.