Key resources table.
| Reagent type (species) or resource |
Designation | Source or reference | Identifiers | Additional information |
|---|---|---|---|---|
| Strain, strain background (Saccharomyces cerevisiae) | CEN.PK113-7D | Nielsen lab | MATa, MAL2-8c, SUC2 | |
| Commercial assay or kit | Qiagen RNeasy Mini Kit | Qiagen | Cat # 74106 | |
| Commercial assay or kit | Qubit RNA HS Assay Kit | Thermo Fisher | Cat # Q32852 | |
| Commercial assay or kit | Illumina TruSeq Stranded mRNA Library Prep Kit | Illumina | Cat # RS-122–2101 | |
| Commercial assay or kit | Pierce BCA Protein Assay Kit | Thermo Fisher | Cat # 23225 | |
| Commercial assay or kit | TMT10plex Isobaric Label Reagent Set | Thermo Fisher | Cat # 90110 | |
| Commercial assay or kit | SCIEX aTRAQ Reagents Application Kit | Sciex | Cat # 4442678 | |
| Peptide, recombinant protein | UPS2 Proteomics Dynamic Range Standard | Sigma–Aldrich | Cat # UPS2-1SET | |
| Software, algorithm | Proteome Discoverer 2.2 | Thermo Fisher | ||
| Software, algorithm | Mascot 2.5.1 | Matrix Science | ||
| Software, algorithm | R 4.0.3 | R Project |