Table 2.
Top gene ontology category in each cluster, and notable genes found in the cluster.
| Cluster | Gene ontology (GO) term enrichment | Notable genes | Differential expression (MTvsWT) | ||
|---|---|---|---|---|---|
| Top GO biological process category | FDR P-value | FC | FDR P-value | ||
| A | Mitotic cell cycle | 9.94E−17 | ftz-f1 (Dapma7bEVm011018t1) | 2.53 | 4.28E-10 |
| B | Transmembrane transport | 3.83E−07 | INDY (Dapma7bEVm010715t1) | 41.17 | 0 |
| C | Proteolysis | 1.79E−13 | Vtg1 (Dapma7bEVm024402t1) | − 2.45 | 6.74E−09 |
| D | Carbohydrate metabolic process | 6.39E−17 | tobi (Dapma7bEVm003111t1) | − 2.26 | 1.24E−05 |
| E | Proteolysis | 2.38E−09 | epsilonTry (Dapma7bEVm010425t1) | − 3.22 | 4.22E−06 |
MT: DNMT3.1−/− mutant; WT: Wild type; FDR: False discovery rate; FC: Fold change expression between mutant and wild type under starved condition.