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. 2020 Dec 21;6(3):327–338. doi: 10.1038/s41564-020-00836-1

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 2 — Maximum likelihood phylogeny based on the core gene SNP alignment of strains in this study in the context of published ST313 genomes^{5–8,11,21,22,89}. Background shading on phylogeny represents cluster designation (rHierBAPs). Outer ring provides details on the original publication. Grey represents this publication. Figure visualised using iTOL⁶⁹.