Table 1.
Major naturally occurring and genetically modified Cas enzymes used for genome editing.
Name | Cas | Resources | CRISPR/Cas | PAM* | PAM location | Reference |
---|---|---|---|---|---|---|
SpCas9 | Cas9 | Streptococcus pyogenes | Type II | NGG | 3′ | [16], [17] |
SaCas9 | Cas9 | Streptococcus aureus | Type II | NNGRRT | 3′ | [130] |
FnCas9 | Cas9 | Francisella Novicida | Type II | NGG | 3′ | [131] |
NmCas9 | Cas9 | Neisseria meningitidis | Type II | NNNNGATT | 3′ | [132] |
CjCas9 | Cas9 | Campylobacter jejuni | Type II | NNNNRYAC | 3′ | [133] |
St1Cas9 | Cas9 | Streptococcus thermophilus | Type II | NNAGAAW | 3′ | [25], [26] |
St1Cas9 | Cas9 | Streptococcus thermophilus | Type II | NGGNG | 3′ | [25], [26] |
AsCas12a | Cas12a(cpf1) | Acidaminococcus sp. | Type II | TTTV | 5′ | [134] |
LbCas12a | Cas12a(cpf1) | Lachnospiraceae bacterium | Type II | TTTV | 5′ | [134] |
FnCas12a | Cas12a(cpf1) | Francisella Novicida | Type II | TTTN or YTN | 5′ | [134], [135] |
LsCas13# | Cas13 (C2c2) | Leptotrichia shahii | Type VI | [23] | ||
Cas14& | Cas14 | Archaea | [24] | |||
FnCas9 variant | Cas9 | Modified FnCas9 | Type II | YG | 3′ | [131] |
Modified SpCas9 | Cas9 | Engineered SpCas9 | Type II | NGA or NAG | 3′ | [136] |
SaCas9-KKH | Cas9 | Engineered SaCas9 | Type II | NNNRRT | 3′ | [29] |
SpCas9-HF | Cas9 | Engineered SpCas9 | Type II | NGG | 3′ | [137] |
eSpCas9 | Cas9 | Engineered SpCas9 | Type II | NGG | 3′ | [138] |
SpCas9-NG | Cas9 | Engineered SpCas9 | Type II | NG | 3′ | [28] |
xCas9 | Cas9 | Engineered SpCas9 | Type II | NG | 3′ | [139] |
Sniper-Cas9 | Cas9 | Engineered SpCas9 | Type II | NGG | 3′ | [140] |
evoCas9 | Cas9 | Mutated SpCas9 | Type II | NGG | 3′ | [141] |
HypaCas9 | Cas9 | Mutated SpCas9-HF | Type II | NGG | 3′ | [142] |
Cas9-NRNH | Cas9 | Engineered SpCas9 | Type II | NRNH | 3′ | [143] |
SpG | Cas9 | Engineered SpCas9 | Type II | NGN | 3′ | [31] |
SpRY | Cas9 | Engineered SpCas9 | Type II | NRN or NYN | 3′ | [31] |
* N is any nucleotide. R is A or G. H is A, C or T. Y is C or T. W is A or T. # Cas13 targets RNA sequences instead of DNA; $ Cas14 targets ssDNAs instead of dsDNAs, which doesnot require a PAM.