Table 1.
Protein | Ligand | Binding affinity (kcal/mol) | Hydrogen bonding | Hydrophobic interaction | Electrostatic interaction |
---|---|---|---|---|---|
Bcl-2 | Myricetin | −7.3 | – | PHE63 | – |
GLY104 | |||||
Galangin | −7.3 | ARG66 | PHE63 | – | |
TYR67 | |||||
Apigenin | −7.2 | ARG105 | PHE63 | – | |
Fisetin | −7.1 | – | – | PHE63 | |
Biochanin A | −6.9 | – | TYR161 | ASP62 | |
Bcl-xl | Fisetin | −8.8 | ASP133 | PHE105 | ARG139 |
ARG139 | ARG139 | ||||
GLU129 | ALA142 | ||||
GLY138 | ALA104 | ||||
Apigenin | −8.6 | ARG139 | ALA104 | – | |
PHE105 | |||||
Biochanin A | −8.5 | SER106 | LEU130 | – | |
GLU129 | ALA104 | ||||
ASN136 | PHE105 | ||||
LEU108 | |||||
ARG139 | |||||
ALA142 | |||||
Myricetin | −8.1 | ASP133 | PHE105 | ARG139 | |
ARG139 | ARG139 | ||||
GLU129 | ALA104 | ||||
Galangin | −8.0 | LEU108 | LEU130 | – | |
PHE105 | |||||
ALA142 | |||||
ARG139 | |||||
ALA104 | |||||
ARG102 | |||||
LEU108 |