TABLE 1.
Enriched GO biological processes for each WGCNA module. Only top three are shown. NA: not applicable, no GO ID was identified.
| Modules | No. of genes | GO IDs | GO description |
|---|---|---|---|
| palevioletred1 | 1,485 | GO: 0140375, GO: 0004896, GO: 0030246 | Immune receptor activity, cytokine receptor activity, carbohydrate binding |
| Whitesmoke | 2,643 | GO: 0046873, GO: 0015370, GO: 0015077 | Metal ion transmembrane transporter activity, solute: sodium symporter activity, monovalent inorganic cation transmembrane transporter activity |
| Gray | 786 | NA | NA |
| Darkmagenta | 1892 | GO: 0030280, GO: 0098631, GO: 0098632 | Structural constituent of skin epidermis, cell adhesion mediator activity, cell-cell adhesion mediator activity |
| Greenyellow | 3,361 | GO: 0019787, GO: 0004842, GO: 0016887 | Ubiquitin-like protein transferase activity, ubiquitin-protein transferase activity, ATPase activity |
| deeppink2 | 740 | GO: 0018455 | Alcohol dehydrogenase [NAD(P)+] activity |
| Navajowhite | 1,184 | GO: 0005201, GO: 0005539, GO: 0005518 | Extracellular matrix structural constituent, glycosaminoglycan binding, collagen binding |
| Orangered | 5,881 | GO: 0004984, GO: 0003735, GO: 0005549 | Olfactory receptor activity, structural constituent of ribosome, odorant binding |
| lightpink2 | 61 | NA | NA |
| lightpink1 | 260 | NA | NA |
| Thistle | 614 | GO: 0030545, GO: 0070851, GO: 0048018 | Receptor regulator activity, growth factor receptor binding, receptor ligand activity |
| mistyrose4 | 229 | GO: 0008242, GO: 0140,097 | omega peptidase activity, catalytic activity, acting on DNA |
| mediumpurple3 | 130 | NA | NA |
| tan2 | 517 | GO: 0004364, GO: 0098960, GO: 0030594 | Glutathione transferase activity, postsynaptic neurotransmitter receptor activity, neurotransmitter receptor activity |
| coral1 | 130 | NA | NA |
| Palevioletred | 46 | NA | NA |
| darkolivegreen1 | 249 | NA | NA |
| deeppink1 | 81 | GO: 0070325, GO: 0008201, GO: 0048018 | Lipoprotein particle receptor binding, heparin binding, receptor ligand activity |
| darkolivegreen2 | 133 | NA | NA |
| navajowhite3 | 43 | GO: 0030247, GO: 0030246 | Polysaccharide binding, carbohydrate binding |
| blue4 | 65 | NA | NA |