Table 2.

Major types of repeat elements identified in the C. nemoralis genome assembly

Repeat class	Repeat element type	No. of elements	Total length, bp	% of genome
LINE	RTE/Bov-B	1,922,793	657,283,360	18.83
	R1/LOA/Jockey	378,298	203,267,666	5.82
	L2/CR1/Rex	91,512	44,303,678	1.27
	R2/R4/NeSL	15,845	6,537,107	0.19
SINE	Penelope	88,259	27,930,778	0.80
LTR	Gypsy/DIRS1	209,476	286,647,606	8.21
DNA transposon	Tc1-IS630-Pogo	162,488	58,611,608	1.68
	hobo-Activator	147,068	50,294,093	1.44