Table 2. Number and percent of significant genes (mixed model ANOVA, p < 0.01 and pFDR < 0.05) of 6,789 analyzed due to population, treatment, and stage alone, and population-by-treatment, population-by-stage, treatment-by-stage, and population-by-treatment-by-stage interactions.

	Population	Treatment	Stage	Population X Treatment	Population X Stage	Treatment X Stage	Population X Treatment X Stage
# Sig. Genes (p < 0.01)	85	270	367	431	108	118	114
% Sig. Genes (p < 0.01)	1.25	3.98	5.41	6.35	1.59	1.74	1.68
# Sig. Genes pFDR (p < 0.05)	34	63	196	53	39	59	36

17.35% (1,178 genes) were significantly differently expressed (mixed model ANOVA, p < 0.01).