Table 1. Free Energies from One-step Perturbation for Both Reference States in the E105 Sitea.
P1′ | mut at 105 | RDR p_contr | RDR ΔΔGR>N | R2R p_contr | R2R ΔΔGR>N |
---|---|---|---|---|---|
Ile | Ala | 89.7 | –16.2 | 28.52 | 1.0 |
Arg | 0.52 | 110.2 | 16.15 | –1.9 | |
Asn | 26.99 | –5.1 | 11.18 | 3.4 | |
Asp | 30.38 | –4.2 | 11.77 | –4.6 | |
Cys | 0.89 | –10.5 | 2.84 | –16.3 | |
Gly | 2.11 | –1.8 | 1.66 | –6.9 | |
Gln | 1.08 | 6.0 | 5.81 | 6.6 | |
Glu | 17.99 | –6.0 | 17.97 | –1.2 | |
HisA | 1.23 | –24.3 | 6.03 | –8.8 | |
HisB | 0.84 | –4.2 | 5.51 | –7.0 | |
Ile | 2.75 | –14.7 | 3.00 | –1.2 | |
Leu | 4.97 | –7.0 | 1.02 | 2.2 | |
Lys | 0.25 | –5.8 | 1.45 | 0.3 | |
Met | 0.59 | –20.7 | 5.18 | 2.4 | |
Phe | 0.35 | 44.5 | 0.98 | 10.2 | |
Ser | 65.53 | 3.7 | 16.27 | –12.6 | |
Thr | 26.89 | –2.2 | 16.59 | –2.6 | |
Trp | 0.45 | –79.2 | 0.30 | 67.2 | |
Tyr | 0.56 | –9.1 | 0.37 | 6.9 | |
Val | 11.52 | –1.2 | 8.14 | –1.2 | |
Pro | Ala | 76.64 | –9.9 | 25.70 | –8.5 |
Arg | 0.60 | 162.3 | 18.84 | –20.0 | |
Asn | 8.47 | –0.3 | 10.91 | –11.8 | |
Asp | 10.44 | 2.7 | 8.06 | 4.0 | |
Cys | 0.78 | 4.0 | 6.13 | 0.6 | |
Gly | 1.74 | 0.1 | 0.99 | 6.5 | |
Gln | 0.45 | 4.3 | 6.03 | 14.6 | |
Glu | 7.49 | 7.7 | 19.62 | 5.6 | |
HisA | 5.28 | 15.0 | 17.22 | –5.1 | |
HisB | 16.48 | –2.0 | 19.60 | –8.4 | |
Ile | 0.78 | –7.2 | 3.13 | 3.0 | |
Leu | 4.37 | –1.4 | 0.67 | 16.2 | |
Lys | 0.67 | –69.4 | 8.21 | –4.1 | |
Met | 1.00 | –16.1 | 7.58 | –15.2 | |
Phe | 0.39 | 36.0 | 8.43 | –5.1 | |
Ser | 31.17 | 2.8 | 10.00 | 8.0 | |
Thr | 14.64 | 6.2 | 3.22 | 3.3 | |
Trp | 0.47 | –187.3 | 4.55 | –21.7 | |
Tyr | 0.45 | 485.5 | 1.91 | 12.0 | |
Val | 6.51 | 2.3 | 13.28 | –3.1 |
Free energies are reported for two P1′ amino acids, Ile and Pro. Next to the ΔΔG values (reported in kJ/mol), the percentage of contributing frames are reported as an average over both bound and unbound states. HisA: Nδ1-H tautomer; HisB: Nϵ2–H tautomer.