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. 2021 Feb 11;61(3):1193–1203. doi: 10.1021/acs.jcim.0c01216

Table 6. Comparison of the Final Results from Simulation and Experiment for Both Sites of Point Mutation and Different P1′ Amino Acidsa.

  mutation at 105
mutation at 171
  P1’ = Ile
P1’ = Pro
P1’ = Ile
P1’ = Pro
  sim exp sim exp Sim exp sim exp
Ala –19.9 –1.2 –14.3 11.5
Arg –2.5 –14.7   –4.1 4.9
Asn –14.1 –16.7   –0.8   –1.8
Asp 1.1   6.9   –10.3   –3.9
Cys –13.8 –12.2   5.4 0.7
Gly –1.8 0.1   0   0  
Gln –5.5 11.8   –8.4   –2.1
Glu 0 0   –9.9 –8.2
HisA –14.7 –1.1   0.9   –4.5  
HisB –16.5 –3.6   3.4   10.9  
Ile –9.7 6.1   0.9   –10.0  
Leu –10.7 7.2   0.3   –7.8  
Lys –11.4   16.1   –4.5 5.3  
Met –6.2 –12.3 0.8   8.3  
Phe 1.5   5.3   3.0   6.7  
Ser –22.2 12.9   –3.7 6.3  
Thr –11.9 11.5   –6.6   0.2  
Trp –79.5 –18.2   –1.2 3.8  
Tyr –9.4 9.0   16.8   –0.3  
Val –9.7 0.0 –8.7 –7.1
a

Relative substrate binding free energies (“sim” column) are reported for the mutations Glu105Xxx and Gly171Xxx (relative to the unmated protein). In the columns with the experimental results, check marks/horizontal bars mark mutations that were found/not found in the screening. All values are reported in kJ/mol. HisA: Nδ1–H tautomer; HisB: Nϵ2–H tautomer.