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. 2021 Mar 24;12:631144. doi: 10.3389/fmicb.2021.631144

TABLE 1.

Oligonucleotide primers used to amplify and sequence 18S rDNA, 28S rDNA, ITS, COI, and rbcL fragments from E. zodiacus.

Name Marker Sequence (5′–3′) References
28F SSU CGA ATT CAA CCT GGT TGA TCC TGC CAG T Saldarriaga et al., 2003
42R SSU CCG GAT CCT GAT CCT TCT GCA GGT TCA CCT AC Saldarriaga et al., 2003
R-582 SSU AAT TAC CGC GGC TGC TGG CAC CV Hadziavdic et al., 2014
F-898 SSU AGA GGT GAA ATT CTY RGA Hadziavdic et al., 2014
R-1200 SSU CCC GTG TTG AGT CAA ATT AAG C Hadziavdic et al., 2014
F-1422 SSU ATA ACA GGT CTG TGA TGC CC Hadziavdic et al., 2014
D1R-F LSU d1-d2 ACC CGC TGA ATT TAA GCA TA Lundholm et al., 2002
D2C-R LSU d1-d2 CCT TGG TCC GTG TTT CAA GA Lundholm et al., 2002
ITS1 ITS TCC GTA GGT GAA CCT GCG G Utama et al., 2017
ITS4 ITS TCC TCC GCT TAT TGA TAT GC Utama et al., 2017
rbcL66+ rbcL TTA AGG AGA AAT AAA TGT CTC AAT CTG Alverson et al., 2007
rbcL1255− rbcL TTG GTG CAT TTG ACC ACA GT Alverson et al., 2007
rbcL527+ rbcL AAA ACA TTC CAA GGT CCT GCT Alverson et al., 2007
rbcL587− rbcL GTC TAA ACC ACC TTT TAA MCC TTC V Alverson et al., 2007
Z3COI-F COI GGC AAC AGG AAC TAA TCT T This study
Z3COI-R COI CTA CTA GAA GAC AAT GCT TC This study

+ Forward PCR amplification primer; − Reverse PCR amplification primer.