TABLE 2.
Data collected from miRNASNPv3, it shows microRNAs SNP, frequent, its position, allele, region and enthalpy.
| pre-miRNA | SNP ID | Position | Ref/Alt | Region | ΔG | Predicted effect on mature miRNA expression |
| miR-101-2 | rs138231885 | chr9:4850301 | T/C | pre-miRNA | −3.1 | up |
| miR-106b | rs72631827 | chr7: 99691652 | C/A | pre-miRNA | 0 | mild |
| miR-107 | rs199975460 | chr10: 91352545 | T/C | pre-miRNA | −0.7 | mild |
| miR-1229-3p | rs200647784 | chr5: 179225292 | T/C | in_mature | −0.3 | mild |
| miR-1229-3p | rs2291418 | chr5: 179225324 | G/A | in_mature | 0 | mild |
| miR-126 | rs199992070 | chr9: 139565134 | C/T | pre-miRNA | 3 | down |
| hsa-miR-128-1-5p | rs117812383 | chr2: 136422988 | G/A | pre-miRNA | 2.7 | down |
| miR-130b | rs72631822 | chr22: 22007634 | G/A | pre-miRNA | −1 | mild |
| miR-130b | rs140403670 | chr22: 22007661 | G/A | in_mature | 3.9 | down |
| miR-132 | rs551930279 | chr17:2050002 | G/T | pre-miRNA | 0 | mild |
| miR-132 | rs551930279 | chr17:2050003 | G/A | pre-miRNA | 0 | mild |
| miR-135b | rs573530355 | chr1:205448310 | C/G | pre-miRNA | 0.8 | mild |
| miR-135b | rs139405984 | chr1: 205417483 | C/G | pre-miRNA | 0 | mild |
| miR-135b | rs139405984 | chr1: 205417483 | C/T | pre-miRNA | 0 | mild |
| miR-146a | rs76149940 | chr10: 104196269 | C/T | pre-miRNA | 1.9 | mild |
| miR-146b | rs201978234 | chr10: 102436580 | C/A | pre-miRNA | 2.9 | down |
| miR-146b | rs201978234 | chr10: 102436580 | C/T | pre-miRNA | 2.9 | down |
| hsa-mir-16-1 | rs371922256 | chr13:50048974 | T/C | pre-miRNA | 0.6 | mild |
| hsa-mir-16-1 | rs72631826 | chr13:50049007 | A/G | pre-miRNA | 0.5 | mild |
| hsa-mir-16-1 | rs72631826 | chr13: 50623143 | A/G | pre-miRNA | 0.5 | mild |
| miR-188 | rs186369276 | chrX: 50003535 | G/T | in_mature | 4.9 | down |
| hsa-miR-188-3p | rs191840972 | chrX: 49768168 | C/T | in_seed | 2.5 | down |
| miR-193 | rs60406007 | chr17:31560014 | G/T | pre-miRNA | 4 | down |
| miR-20a | rs185831554 | chr13: 91351102 | T/G | pre-miRNA | 0.2 | mild |
| miR-212 | rs539716752 | chr17:2050380 | G/T | pre-miRNA | 0.9 | mild |
| miR23b | rs201848546 | chr9: 95085213 | G/A | pre-miRNA | 4.2 | down |
| miR-26b | rs565919718 | chr2:218402647 | C/T | pre-miRNA | 2.2 | down |
| miR-26b | rs188612260 | chr2:218402684 | C/T | pre-miRNA | 0 | mild |
| miR-298 | rs201036298 | chr20: 58818294 | T/G | in_mature | 3.4 | down |
| miR-30a | rs149150037 | chr6: 71403567 | G/A | in_mature | 1.6 | mild |
| miR-30a | rs149150037 | chr6: 71403567 | G/C | in_mature | 1.6 | mild |
| miR-30a | rs190842689 | chr6: 71403603 | C/A | in_mature | 3 | down |
| miR-30a | rs190842689 | chr6: 71403603 | C/G | in_mature | 3 | down |
| miR-30a | rs190842689 | chr6: 71403603 | C/T | in_mature | 3 | down |
| miR-328 | rs188892061 | chr16: 67202389 | C/A | Mature | 5.8 | down |
| miR-328 | rs188892061 | chr16: 67202389 | C/T | Mature | 5.8 | down |
| miR-328 | rs188892061 | chr16: 67202389 | C/G | Mature | 3.10 | down |
| miR-329 | rs34557733 | chr14: 101026792 | G/GA | pre-miRNA | 1.9 | mild |
| miR-329 | rs201061298 | chr14: 101493169 | G/A | pre-miRNA | 2.7 | down |
| miR-329-2 | rs377234552 | chr14:101027141 | T/C | pre-miRNA | 0 | mild |
| miR-329-2 | rs377234552 | chr14:101027141 | T/A | pre-miRNA | 0 | mild |
| miR-33 | rs77809319 | chr22: 41900991 | A/G | in_seed | 0 | mild |
| miR-339 | rs72631831 | chr7: 1023020 | C/T | pre-miRNA | −0.7 | mild |
| miR-339 | rs72631820 | chr7: 1022963 | T/C | in_mature | 0.6 | mild |
| miR-339 | rs145196722 | chr7: 1022990 | C/T | in_mature | −0.7 | mild |
| miR-339 | rs72631831 | chr7: 1023020 | C/T | pre-miRNA | −0.7 | mild |
| miR-339-5p | rs567174785 | chr7:1023017 | G/A | pre-miRNA | 1.6 | mild |
| miR-34a | rs201359809 | chr1: 9151688 | C/G | pre-miRNA | 3.5 | down |
| miR-34a | rs72631823 | chr1: 9151723 | C/T | pre-miRNA | 0.87 | mild |
| miR-34a | rs35301225 | chr1: 9151743 | C/T | in_mature | 4.8 | down |
| miR-34a | rs35301225 | chr1: 9151743 | C/A | in_mature | 4.7 | down |
| miR-603 | rs11014002 | chr10:24275724 | C/T | pre-miRNA | −1.8 | mild |
| miR-603 | rs11014002 | chr10:24275724 | C/A | pre-miRNA | 0 | mild |
Finally, the effect of SNP on microRNA expression is shown.ΔG, The difference of MFE between wild type allele and mutant allele. Underlined SNPs have linkage disequilibrium.