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. 2021 Mar 30;77(Pt 4):438–446. doi: 10.1107/S2059798321001145

Table 2. Validation statistics for models rebuilt in this work.

  PDB entry 3fyj Rebuilt PDB entry 3fhr Rebuilt
Resolution (Å) 3.8 3.8 1.8 1.8
R work 0.328 (0.265) 0.234 0.226 0.212
R free 0.388 (0.317) 0.275 0.267 0.236
Ramachandran outliers (%) 14.86 0.00 0.00 0.00
Favoured (%) 56.52 96.39 95.85 97.36
Ramachandran Z-score −6.81 −0.4 −2.05 −0.37
Rotamer outliers 20.31 0.00 8.13 0.00
Clashscore 69.56 2.35 7.87 3.82
CaBLAM outliers (%) 13.3 1.1 0.8 0.4
MolProbity score 4.24 1.26 2.41 1.29

PDB entry 3fyj was originally refined with a single overall B factor, leading to very high R factors. The results after B-factor-only refinement in phenix.refine are shown in parentheses.

Prisant et al. (2020).