Table 4.
Important QTL candidate genes and their functions in fruiting body development.
| Functional category | QTL | Gene name | Functional description | KEGG description | GO description |
|---|---|---|---|---|---|
| Environmental response | pq5.2 | jgi.p|Lenedo1|1114176 | hexose transporter | NA | NA |
| pq2.1 | jgi.p|Lenedo1|1157672a | opt oligopeptide transporter | NA | NA | |
| Signal transduction | pq1.3 | jgi.p|Lenedo1|1040279b | cyclase-associated protein | Membrane trafficking; Exosome | NA |
| qPT.3.1 | jgi.p|Lenedo1|88319 | calcium activated cation channel | NA | Ion channel activity, ion transport | |
| qSD.7.1 | jgi.p|Lenedo1|1194336 | WD40 repeat-like protein | NA | NA | |
| pq1.3 | jgi.p|Lenedo1|1206258b | WD40 repeat-like protein | NA | NA | |
| pq5.2 | jgi.p|Lenedo1|1114625 | WD40 repeat-like protein | RNA transport | Cellular response to osmotic stress | |
| Transcription regulation | pq1.3 | jgi.p|Lenedo1|538809 | transcription factor | NA | Regulation of transcription, DNA-templated |
| qPD.2.1 | jgi.p|Lenedo1|1032489 | HD1 homeodomain mating-type protein Le.a1-2 | NA | Regulation of transcription, DNA-templated | |
| pq2.1 | jgi.p|Lenedo1|1164760a | Transcription and mRNA export factor | NA | Transcription coactivator activity | |
| pq2.1 | jgi.p|Lenedo1|26471 | myb3r transcription factor | Transcription factors | DNA binding | |
| pq2.1 | jgi.p|Lenedo1|30321 | ace1 transcription factor | NA | Regulation of transcription, DNA-templated | |
| pq5.2 | jgi.p|Lenedo1|1067568 | Chromatin modification-related protein EAF7 | NA | Regulation of transcription, DNA-templated | |
| qSD.7.1 | jgi.p|Lenedo1|305037 | predicted protein | NA | Regulation of transcription, DNA-templated | |
| Protein degradation | pq5.2 | jgi.p|Lenedo1|1043151 | e3 ubiquitin-protein ligase rnf13-like | Ubiquitin system | NA |
| pq2.1 | jgi.p|Lenedo1|1076755 | PCI-domain-containing protein | Ubiquitin system | NA | |
| Cell cycle regulation | pq1.3 | jgi.p|Lenedo1|1174308b | cell cycle control protein | NA | NA |
| pq1.3 | jgi.p|Lenedo1|1093770 | TPR-like protein | Cell cycle, Cell cycle - yeast, Meiosis - yeast | Regulation of mitotic cell cycle | |
| Cell adhesion | qSD.7.1 | jgi.p|Lenedo1|1160703 | fasciclin-like protein | NA | NA |
| qSD.7.1 | jgi.p|Lenedo1|1044962 | cell adhesion protein byn-1 | NA | NA | |
| Cell wall remodeling (CAZymes) | qY.5.1 | jgi.p|Lenedo1|1057255 | glycoside hydrolase family 3 protein | Starch and sucrose metabolism | NA |
| pq5.2 | jgi.p|Lenedo1|1101195 | glycoside hydrolase family 17 protein | NA | NA | |
| pq5.2 | jgi.p|Lenedo1|1101211 | glycoside hydrolase family 79 protein | NA | NA | |
| pq5.2 | jgi.p|Lenedo1|881996 | glycoside hydrolase family 61 protein | NA | Hydrolase activity | |
| pq2.1 | jgi.p|Lenedo1|1031698a | glycoside hydrolase family 79 protein | NA | NA | |
| qSD.7.1 | jgi.p|Lenedo1|1205574 | glycoside hydrolase family 47 protein | Various types of N-glycan biosynthesis | NA | |
| Others | pq2.1 | jgi.p|Lenedo1|1164647 | cytochrome p450 | NA | NA |
| pq2.1 | jgi.p|Lenedo1|1032363 | cytochrome P450 | Steroid biosynthesis;Cytochrome P450 | NA | |
| pq2.1 | jgi.p|Lenedo1|1164679 | cytochrome p450 | NA | NA | |
| qSD.7.1 | jgi.p|Lenedo1|1119574 | cytochrome P450 | NA | NA | |
| qSD.7.1 | jgi.p|Lenedo1|1045197 | cytochrome p450 | NA | NA | |
| pq2.1 | jgi.p|Lenedo1|1077466a | BAR-domain-containing protein | Endocytosis; Fc gamma R-mediated phagocytosis | Establishment or maintenance of cell polarity regulating cell shape | |
| pq5.2 | jgi.p|Lenedo1|1168070 | septin family protein | NA | GTP binding |
a
Genes detected as FP candidate genes in both years.
b
Genes detected as PW candidate genes in both years.