TABLE 2.
16S rRNA copies extracted from genomes and incorrectly taxonomically assigned.
Name | Access | 16S rRNA gene locus tag | SILVA SSU r138 | ||
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Order | Family | Genus | |||
Aquabacter cavernae Sn-9-2T | GCF_003993795.1 | EJJ38_RS13400 | Rhizobiales | Xanthobacteraceae | Xanthobacter |
Aquabacter spiritensis DSM 9035 T | GCF_004346185.1 | EDC64_RS23195 | Rhizobiales | Xanthobacteraceae | NA |
“Mesorhizobium composti” CC-YTH430T | GCF_004801285.1 | E6C48_RS19465 | Rhizobiales | Rhizobiaceae | Pseudaminobacter |
Mesorhizobium loti LMG 6125T | GCF_003024615.1 | C7U62_RS19230 | Rhizobiales | Rhizobiaceae | Ensifer |
Mesorhizobium plurifarium LMG 11892T | GCF_003024595.1 | C7U60_RS18680 | Caulobacterales | Caulobacteraceae | Brevundimonas |
C7U60_RS19135; C7U60_RS21155 | Rhizobiales | Rhizobiaceae | Ensifer | ||
C7U60_RS18920 | NA | NA | NA | ||
Methylobacterium crusticola MIMD6T | GCF_003574465.1 | DT057_RS35310 | Burkholderiales | Oxalobacteraceae | Massilia |
DT057_RS35040 | Rhizobiales | Beijerinckiaceae | NA | ||
DT057_RS35290 | Burkholderiales | NA | NA | ||
DT057_RS05830; DT057_RS35200 | Rhizobiales | NA | NA | ||
DT057_RS35260 | NA | NA | NA | ||
Methylobacterium frigidaeris IER25-16T | GCF_002759055.1 | CS379_RS09215 | Bacillales | Bacillaceae | Bacillus |
Mongoliimonas terrestris MIMtkB18T | GCF_001927285.1 | BUQ68_RS19420 | Rhizobiales | Pleomorphomonadaceae | Chthonobacter |
Oharaeibacter diazotrophicus DSM 102969T | GCF_004362745.1 | EDD54_RS17735; EDD54_RS20245 | Rhizobiales | Pleomorphomonadaceae | Chthonobacter |
Oharaeibacter diazotrophicus SM30T | GCF_011317485.1 | GRZ53_RS14600; GRZ53_RS22395 | Rhizobiales | Pleomorphomonadaceae | Chthonobacter |
Rhizobium marinum MGL06T | GCF_000705355.1 | EO99_RS0125160 | Rhizobiales | Rhizobiaceae | Pseudorhizobium |
Rhizobium vignae CCBAU 05176T | GCF_000732195.1 | GQ59_RS30420 | Bacteroidales | Prevotellaceae | Prevotella |
GQ59_RS30195 | Rhizobiales | Rhizobiaceae | Neorhizobium | ||
GQ59_RS30200 | Rhizobiales | Rhizobiaceae | NA |
Taxonomic assignments using IdTaxa and reference dataset SILVA SSU r138.