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. 2020 Nov 4;15(3):862–878. doi: 10.1038/s41396-020-00819-4

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 6 — Presence (blue) or absence (white) of essential tra genes for IncF plasmids (A), and IncI plasmids (B). Genes and panels in grey are non-essential for pilus biogenesis, DNA transfer or conjugation, according to Koraiman [51] (A) and Komano [49, 50] (B). ESBL-plasmids are indicated by an asterisk: green indicates spread to multiple recipient populations, orange indicates conjugation with only one replicate population, and red indicates no transfer. Non-ESBL-plasmids are labelled in black. For the traY gene of the IncI plasmids, we indicate whether the gene found corresponds to the version carried by IncI1 or IncIγ plasmids (white text in B). Plasmid p6A_IncI/IncF is shown on both A and B, but only the IncI1 transfer system is complete.